RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 SLC25A51Q9H1U9 297 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 FAM83DQ9H4H8 585 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 WDR70Q9NW82 654 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 ALG6Q9Y672 507 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 RNF215Q9Y6U7 377 aa19.75■□□□□ 0.75
SHROOM1-204ENST00000440118 PTPRQQ9UMZ3 2332 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 NTN3O00634 580 aaPredicted RBP19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 NUDT21O43809 227 aaKnown RBP19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 DXOO77932 396 aaKnown RBP19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 SOD1P00441 154 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 ADCY8P40145 1251 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 HADHBP55084 474 aaKnown RBP19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 INHBCP55103 352 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 MAZP56270 477 aaKnown RBP19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 CTBSQ01459 385 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 HLTFQ14527 1009 aaKnown RBP eCLIP19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 BROXQ5VW32 411 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 C11orf63Q6NUN7 778 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 OGFOD3Q6PK18 319 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 LYSMD3Q7Z3D4 306 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 SPRED1Q7Z699 444 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 SFTPA2Q8IWL1 248 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 RAVER1Q8IY67 606 aaKnown RBP19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 PTCD2Q8WV60 388 aaKnown RBP19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 KCNE4Q8WWG9 221 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 HAUS1Q96CS2 278 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 IMP4Q96G21 291 aaKnown RBP19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 MRFAP1L1Q96HT8 127 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 RBM41Q96IZ5 413 aaKnown RBP19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 AGAP2Q99490 1192 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 ZFYVE1Q9HBF4 777 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 SPATS2LQ9NUQ6 558 aaKnown RBP19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 SAE1Q9UBE0 346 aaPredicted RBP19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 APPL1Q9UKG1 709 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 TFR2Q9UP52 801 aa19.74■□□□□ 0.75
SHROOM1-204ENST00000440118 MACROD2A1Z1Q3 448 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 PMPCBO75439 489 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 TNFSF15O95150 251 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 ZRANB2O95218 330 aaKnown RBP eCLIP19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 LCA5LO95447 670 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 PNLIPP16233 465 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 SPINT3P49223 89 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 PDX1P52945 283 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 EIF3IQ13347 325 aaKnown RBP19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 AMZ1Q400G9 498 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 FAM182AQ5T1J6 154 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 ALS2CLQ60I27 953 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 B3GNT8Q7Z7M8 397 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 ZC3H18Q86VM9 953 aaKnown RBP19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 NLRP8Q86W28 1048 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 KATNAL2Q8IYT4 538 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 LIN37Q96GY3 246 aaPredicted RBP19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 CRELD1Q96HD1 420 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 PANX2Q96RD6 677 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 GPR63Q9BZJ6 419 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 GLOD4Q9HC38 313 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 KLHL8Q9P2G9 620 aaPredicted RBP19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 ZNHIT2Q9UHR6 403 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 ATXN7L1Q9ULK2 861 aaPredicted RBP19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 SHOC2Q9UQ13 582 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 PCDHGA8Q9Y5G5 932 aa19.73■□□□□ 0.75
SHROOM1-204ENST00000440118 IGSF10Q6WRI0 2623 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 A0A1W2PQM1 296 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 RGSL1A5PLK6 1076 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 SOWAHDA6NJG2 315 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 EIF4E1BA6NMX2 242 aaKnown RBP19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 AGRPO00253 132 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 MTSS1O43312 755 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 ECEL1O95672 775 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 PIRTP0C851 137 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 JMJD7P0C870 316 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 PECAM1P16284 738 aaPredicted RBP19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 PTPN3P26045 913 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 ALDH4A1P30038 563 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 CDK18Q07002 472 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 LRP8Q14114 963 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 PRKD1Q15139 912 aaPredicted RBP19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 TEX44Q53QW1 395 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 ZNF569Q5MCW4 686 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 PHF19Q5T6S3 580 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 RAB11FIP2Q7L804 512 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 NRROSQ86YC3 692 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 JAMLQ86YT9 394 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 TMTC1Q8IUR5 882 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 SPACA3Q8IXA5 215 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 RCOR2Q8IZ40 523 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 FBXO39Q8N4B4 442 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 FCRL3Q96P31 734 aaPredicted RBP19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 SPATA16Q9BXB7 569 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 RBSNQ9H1K0 784 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 ASCL3Q9NQ33 180 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 RAD18Q9NS91 495 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 ZNF711Q9Y462 761 aa19.72■□□□□ 0.75
SHROOM1-204ENST00000440118 PLD2O14939 933 aa19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 NDUFA10O95299 355 aa19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 MT-CYBP00156 380 aaPredicted RBP19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 FUCA1P04066 466 aa19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 ATP1A1P05023 1023 aaKnown RBP19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 FGF1P05230 155 aa19.71■□□□□ 0.75
SHROOM1-204ENST00000440118 MLLT3P42568 568 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms