RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 HEPHQ9BQS7 1158 aa14.55□□□□□ -0.08
TNFRSF1A-204ENST00000440083 GPR174Q9BXC1 333 aa14.55□□□□□ -0.08
TNFRSF1A-204ENST00000440083 WSB2Q9NYS7 404 aaPredicted RBP14.55□□□□□ -0.08
TNFRSF1A-204ENST00000440083 C1QTNF3-AMACRE9PGA6 284 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 PIGNO95427 931 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 IGSF6O95976 241 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 UGT2B4P06133 528 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 NEFHP12036 1026 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 DHPSP49366 369 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 LIMK2P53671 638 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 SNRPD1P62314 119 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 ZKSCAN8Q15776 578 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 CCDC6Q16204 474 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 PDK4Q16654 411 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 MYLK3Q32MK0 819 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 SIRPB2Q5JXA9 342 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 LPCAT2Q7L5N7 544 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 SPATS2Q86XZ4 545 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 SLC41A1Q8IVJ1 513 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 CACNA2D3Q8IZS8 1091 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 NDUFAF2Q8N183 169 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 OTUD6BQ8N6M0 293 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 ZC3H10Q96K80 434 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 CABS1Q96KC9 395 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 NUDCD1Q96RS6 583 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 SRPK1Q96SB4 655 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 OMDQ99983 421 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 C6orf106Q9H6K1 298 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 RAB23Q9ULC3 237 aa14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 ATXN2Q99700 1313 aaKnown RBP14.54□□□□□ -0.08
TNFRSF1A-204ENST00000440083 CEP192Q8TEP8 1941 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 TNRC6BQ9UPQ9 1833 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 LOC285095A0A1B0GVY8 99 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 TPP1O14773 563 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 NDUFS2O75306 463 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 GLRA3O75311 464 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 RFPL1O75677 317 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 SEMA4FO95754 770 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 NDST3O95803 873 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 EPOP01588 193 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 PRNPP04156 253 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 OXTRP30559 389 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 PLA2G5P39877 138 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 HADHAP40939 763 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 SCNN1BP51168 640 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 LRRC73Q5JTD7 316 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 TSTD2Q5T7W7 516 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 PIP5KL1Q5T9C9 394 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 AGBL4Q5VU57 503 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 FAM46CQ5VWP2 391 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 ESRP1Q6NXG1 681 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 SLC36A4Q6YBV0 504 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 USP30Q70CQ3 517 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 PARS2Q7L3T8 475 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 TRIM42Q8IWZ5 723 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 DCLK2Q8N568 766 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 TMIEQ8NEW7 156 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 CALML6Q8TD86 181 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 FAM122AQ96E09 287 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 HSPA12BQ96MM6 686 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 SMOC1Q9H4F8 434 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 SLC17A7Q9P2U7 560 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 PSAT1Q9Y617 370 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 FRYLO94915 3013 aa14.53□□□□□ -0.08
TNFRSF1A-204ENST00000440083 PTPRZ1P23471 2315 aaPredicted RBP14.52□□□□□ -0.08
TNFRSF1A-204ENST00000440083 VAPBO95292 243 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 POP4O95707 220 aaKnown RBP14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 ATXN1LP0C7T5 689 aaKnown RBP14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 TYK2P29597 1187 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 ADPRHP54922 357 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 TAS2R38P59533 333 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 GALNT3Q14435 633 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 QPCTQ16769 361 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 RALGPS1Q5JS13 557 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 LAIR1Q6GTX8 287 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 NCEH1Q6PIU2 408 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 SRLQ86TD4 932 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 C11orf74Q86VG3 221 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 PLPP6Q8IY26 295 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 ANKS4BQ8N8V4 417 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 CCDC197Q8NCU1 140 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 OR14C36Q8NHC7 312 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 BLOC1S5Q8TDH9 187 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 ATXN7L3BQ96GX2 97 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 KLHL32Q96NJ5 620 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 FAM111AQ96PZ2 611 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 AGAP2Q99490 1192 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 SLC13A1Q9BZW2 595 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 BTBD1Q9H0C5 482 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 NOD2Q9HC29 1040 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 TREX1Q9NSU2 369 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 FGFR1OP2Q9NVK5 253 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 SCML1Q9UN30 329 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 NCKAP1Q9Y2A7 1128 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 SLCO1B1Q9Y6L6 691 aa14.52□□□□□ -0.09
TNFRSF1A-204ENST00000440083 GOLGA8TH3BQL2 631 aa14.51□□□□□ -0.09
TNFRSF1A-204ENST00000440083 GFRA3O60609 400 aa14.51□□□□□ -0.09
TNFRSF1A-204ENST00000440083 RHOBTB1O94844 696 aa14.51□□□□□ -0.09
TNFRSF1A-204ENST00000440083 FSBPO95073 299 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms