RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SIM2Q14190 667 aaPredicted RBP9.03□□□□□ -0.96
COPB1-202ENST00000439561 GRIK4Q16099 956 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 INTS11Q5TA45 600 aaKnown RBP9.03□□□□□ -0.96
COPB1-202ENST00000439561 MFSD4BQ5TF39 518 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 TMEM236Q5W0B7 351 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 ZNF773Q6PK81 442 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 SYTL1Q8IYJ3 562 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 ADGRG5Q8IZF4 528 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 HS3ST5Q8IZT8 346 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 POC5Q8NA72 575 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 ABHD11Q8NFV4 315 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 RMDN1Q96DB5 314 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 CORO1BQ9BR76 489 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 RNF39Q9H2S5 420 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 AGPAT4Q9NRZ5 378 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 INTS7Q9NVH2 962 aaKnown RBP9.03□□□□□ -0.96
COPB1-202ENST00000439561 MTRRQ9UBK8 725 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 PDE10AQ9Y233 779 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 ERGIC3Q9Y282 383 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 KCTD3Q9Y597 815 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 DNAJC15Q9Y5T4 150 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 USP3Q9Y6I4 520 aa9.03□□□□□ -0.96
COPB1-202ENST00000439561 SMIM28A0A1B0GU29 152 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 ZNF487B1APH4 448 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 BTN3A1O00481 513 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 SLC22A3O75751 556 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 FTH1P02794 183 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 RFC2P35250 354 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 HLCSP50747 726 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 FPGSQ05932 587 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 TRIM32Q13049 653 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 LAPTM4AQ15012 233 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 FSCN1Q16658 493 aaKnown RBP9.02□□□□□ -0.97
COPB1-202ENST00000439561 USP41Q3LFD5 358 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 PKDCCQ504Y2 493 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 ANKS6Q68DC2 871 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 SLC2A7Q6PXP3 512 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 BTLAQ7Z6A9 289 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 FUNDC1Q8IVP5 155 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 LRRC52Q8N7C0 313 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 FEM1CQ96JP0 617 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 TBATAQ96M53 351 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 ZFP42Q96MM3 310 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 ZBTB18Q99592 522 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 FEM1AQ9BSK4 669 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 FUNDC2Q9BWH2 189 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 ITM2CQ9NQX7 267 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 ARMC1Q9NVT9 282 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 COMMD8Q9NX08 183 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 SLAMF8Q9P0V8 285 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 LEF1Q9UJU2 399 aaPredicted RBP9.02□□□□□ -0.97
COPB1-202ENST00000439561 SIPA1L1O43166 1804 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 GOLGA8CPA6NN73 597 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 XPNPEP2O43895 674 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 MFN2O95140 757 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 GLP2RO95838 553 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 F9P00740 461 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 HLA-DQB2P05538 268 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 IDO1P14902 403 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 IMPDH1P20839 514 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 CA8P35219 290 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 ADCYAP1R1P41586 468 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 PLA2G16P53816 162 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 VBP1P61758 197 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 MAPRE1Q15691 268 aaKnown RBP9.02□□□□□ -0.97
COPB1-202ENST00000439561 ATP6AP1Q15904 470 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 C1QTNF12Q5T7M4 302 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 TTC23Q5W5X9 447 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 LBX2Q6XYB7 198 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 CLEC20AQ6ZU45 233 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 ITIH5Q86UX2 942 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 HMGCLL1Q8TB92 370 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 TRUB1Q8WWH5 349 aaKnown RBP9.02□□□□□ -0.97
COPB1-202ENST00000439561 MYRFLQ96LU7 910 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 NODALQ96S42 347 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 HGH1Q9BTY7 390 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 TOR3AQ9H497 397 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 WDR70Q9NW82 654 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 KIF17Q9P2E2 1029 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 CD300AQ9UGN4 299 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 FBXW11Q9UKB1 542 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 SLC30A1Q9Y6M5 507 aa9.02□□□□□ -0.97
COPB1-202ENST00000439561 MYBPHLA2RUH7 354 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 CASTOR2A6NHX0 329 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 E5RI56 91 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 UBFD1O14562 309 aaKnown RBP9.01□□□□□ -0.97
COPB1-202ENST00000439561 NDUFS3O75489 264 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ZNF682O95780 498 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 FADS2O95864 444 aaKnown RBP9.01□□□□□ -0.97
COPB1-202ENST00000439561 KRT8P05787 483 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 SLC2A3P11169 496 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ALOX12P18054 663 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 DCKP27707 260 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 SHMT2P34897 504 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 PIK3CGP48736 1102 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ACADVLP49748 655 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 CCT8P50990 548 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ARSFP54793 590 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 SLC13A2Q13183 592 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 SPCS2Q15005 226 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms