RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 CTDSP2O14595 271 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 ATP2A1O14983 1001 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 HCRTR2O43614 444 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 HS6ST1O60243 411 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 TMCC2O75069 709 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 ANXA7P20073 488 aaKnown RBP3.53□□□□□ -1.84
VPS41-207ENST00000439468 CHATP28329 748 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 SSTR2P30874 369 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 HOXD3P31249 432 aaPredicted RBP3.53□□□□□ -1.84
VPS41-207ENST00000439468 HNRNPH1P31943 449 aaKnown RBP3.53□□□□□ -1.84
VPS41-207ENST00000439468 KRT20P35900 424 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 MXI1P50539 228 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 SUOXP51687 545 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 NUDT6P53370 316 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 CRYZQ08257 329 aaKnown RBP3.53□□□□□ -1.84
VPS41-207ENST00000439468 DDR1Q08345 913 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 TRAF3Q13114 568 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 IZUMO4Q1ZYL8 232 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 MFSD4BQ5TF39 518 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 PLEKHA7Q6IQ23 1121 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 TMEM154Q6P9G4 183 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 SLC36A4Q6YBV0 504 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 BRINP3Q76B58 766 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 SDCCAG8Q86SQ7 713 aaPredicted RBP3.53□□□□□ -1.84
VPS41-207ENST00000439468 TICAM1Q8IUC6 712 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 RPAP2Q8IXW5 612 aaPredicted RBP3.53□□□□□ -1.84
VPS41-207ENST00000439468 DCP1BQ8IZD4 617 aaKnown RBP3.53□□□□□ -1.84
VPS41-207ENST00000439468 RHBDF1Q96CC6 855 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 ERP27Q96DN0 273 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 SAT2Q96F10 170 aaPredicted RBP3.53□□□□□ -1.84
VPS41-207ENST00000439468 GRAMD2BQ96HH9 432 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 TXNDC15Q96J42 360 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 LMLNQ96KR4 655 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 EGLN2Q96KS0 407 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 PCYT2Q99447 389 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 NCAPGQ9BPX3 1015 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 MAK16Q9BXY0 300 aaKnown RBP3.53□□□□□ -1.84
VPS41-207ENST00000439468 CNGB3Q9NQW8 809 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 ZNF112Q9UJU3 913 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 CECR2Q9BXF3 1484 aa3.53□□□□□ -1.84
VPS41-207ENST00000439468 IGHV4-28A0A0C4DH34 117 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 OR2A25A4D2G3 310 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 B4DLN1 442 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 VWA5AO00534 786 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 SOCS6O14544 535 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 ACOT8O14734 319 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 P4HA2O15460 535 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 NDUFS7O75251 213 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 JRKO75564 520 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 TSPAN9O75954 239 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 ICAM1P05362 532 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 ADRB2P07550 413 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 FGF3P11487 239 aaPredicted RBP3.52□□□□□ -1.85
VPS41-207ENST00000439468 MAOAP21397 527 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 ACADLP28330 430 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 EIF2DP41214 584 aaKnown RBP3.52□□□□□ -1.85
VPS41-207ENST00000439468 SLC15A1P46059 708 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 MRPL12P52815 198 aaKnown RBP3.52□□□□□ -1.85
VPS41-207ENST00000439468 MFAP4P55083 255 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 BNC1Q01954 994 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 ST3GAL1Q11201 340 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 LRMPQ12912 555 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 EPS8Q12929 822 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 BMP2KLQ5H9B9 411 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 PLEKHS1Q5SXH7 462 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 SIGIRRQ6IA17 410 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 NADSYN1Q6IA69 706 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 ZNF280DQ6N043 979 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 C18orf65Q6ZTR6 163 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 TAOK1Q7L7X3 1001 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 KBTBD6Q86V97 674 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 TEX11Q8IYF3 940 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 BEST3Q8N1M1 668 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 LSMEM1Q8N8F7 131 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 POC5Q8NA72 575 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 IL17RCQ8NAC3 791 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 PGAM5Q96HS1 289 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 SMC6Q96SB8 1091 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 PAFAH2Q99487 392 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 TM6SF1Q9BZW5 370 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 ACSS1Q9NUB1 689 aaPredicted RBP3.52□□□□□ -1.85
VPS41-207ENST00000439468 OGFRQ9NZT2 677 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 POLG2Q9UHN1 485 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 PADI1Q9ULC6 663 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 TMEM5Q9Y2B1 443 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 SNX8Q9Y5X2 465 aa3.52□□□□□ -1.85
VPS41-207ENST00000439468 A0A1W2PR77 199 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 SYNDIG1LA6NDD5 238 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 SCAMP1O15126 338 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 ADAMDEC1O15204 470 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 ASAP2O43150 1006 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 ADAM20O43506 726 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 TIMM44O43615 452 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 PLPP2O43688 288 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 EGFP01133 1207 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 SRPRAP08240 638 aaKnown RBP3.51□□□□□ -1.85
VPS41-207ENST00000439468 PON1P27169 355 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 STX2P32856 288 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 NRIP1P48552 1158 aa3.51□□□□□ -1.85
VPS41-207ENST00000439468 DSCR9P59020 149 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms