RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TUBB1Q9H4B7 451 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 ACTR3BQ9P1U1 418 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 FNDC3AQ9Y2H6 1198 aaKnown RBP13.35□□□□□ -0.27
ACTN1-204ENST00000438964 BOLA1Q9Y3E2 137 aa13.35□□□□□ -0.27
ACTN1-204ENST00000438964 TIMM13Q9Y5L4 95 aaPredicted RBP13.35□□□□□ -0.27
ACTN1-204ENST00000438964 SOWAHBA6NEL2 793 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 YJEFN3A6XGL0 299 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 YBX3P16989 372 aaKnown RBP eCLIP13.34□□□□□ -0.279e-8■■■□□ 15.8
ACTN1-204ENST00000438964 CRHBPP24387 322 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 MZF1P28698 734 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 ARSFP54793 590 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 ADARB1P78563 741 aaKnown RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 NRG1Q02297 640 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 TRIM32Q13049 653 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 ADPRMQ3LIE5 342 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 PAGE2Q7Z2X7 111 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 MIER2Q8N344 545 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 PTGR2Q8N8N7 351 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 FLAD1Q8NFF5 587 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 FRS2Q8WU20 508 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 RNF34Q969K3 372 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 PTERQ96BW5 349 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 NRBF2Q96F24 287 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 GMLQ99445 158 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 C2orf40Q9H1Z8 148 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 SCHIP1Q9P0W5 487 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 KCTD3Q9Y597 815 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 PCDHGA11Q9Y5H2 935 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 MSI1O43347 362 aaKnown RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 CPNE6O95741 557 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 SPNP16150 400 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 FMO3P31513 532 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 TTKP33981 857 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 GP2P55259 537 aaKnown RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 ZNF846Q147U1 533 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 PKN3Q6P5Z2 889 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 SPESP1Q6UW49 350 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 ADCK1Q86TW2 530 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 ANKRD13BQ86YJ7 626 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 CLIP3Q96DZ5 547 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 FEM1AQ9BSK4 669 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 MED10Q9BTT4 135 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 TP63Q9H3D4 680 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 CARS2Q9HA77 564 aaKnown RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 NTN4Q9HB63 628 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 SPC25Q9HBM1 224 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 EML4Q9HC35 981 aaKnown RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 HMG20AQ9NP66 347 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 SCUBE2Q9NQ36 999 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 PMF1-BGLAPU3KQ54 211 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 ZNF831Q5JPB2 1677 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 ASPDHA6ND91 283 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 TBX1O43435 398 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 TSPAN3O60637 253 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 ABCB7O75027 752 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 USP17L7P0C7H9 530 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 PIRTP0C851 137 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 ZNF286BP0CG31 522 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 PRSS56P0CW18 603 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 HRH2P25021 359 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 GTF2E2P29084 291 aaKnown RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 ATICP31939 592 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 FOXD4Q12950 439 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-204ENST00000438964 ATAD3BQ5T9A4 648 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 NEPROQ6NW34 567 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 AFAP1L2Q8N4X5 818 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 OR7A2PQ8NGA2 310 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 FIG4Q92562 907 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 TMEM125Q96AQ2 219 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 FKBP10Q96AY3 582 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 GPR20Q99678 358 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 TBCDQ9BTW9 1192 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 FSD1LQ9BXM9 530 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 TRIM15Q9C019 465 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 SMOC2Q9H3U7 446 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 LRRC4Q9HBW1 653 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 NDFIP2Q9NV92 336 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 VWA7Q9Y334 891 aa13.34□□□□□ -0.27
ACTN1-204ENST00000438964 IQCA1LA6NCM1 817 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 TRIM64A6NGJ6 449 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 AQP12BA6NM10 295 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 CDK14O94921 469 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 INSRRP14616 1297 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 PSMB9P28065 219 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 ADRA1BP35368 520 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 ARCN1P48444 511 aaKnown RBP13.33□□□□□ -0.28
ACTN1-204ENST00000438964 IFITM2Q01629 132 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 CD47Q08722 323 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 ITKQ08881 620 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 UNC50Q53HI1 259 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 LCN8Q6JVE9 175 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 ENPP6Q6UWR7 440 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 GPRIN1Q7Z2K8 1008 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 AQP12AQ8IXF9 295 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 TBL1YQ9BQ87 522 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 AMBRA1Q9C0C7 1298 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 VTA1Q9NP79 307 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 MYOZ2Q9NPC6 264 aa13.33□□□□□ -0.28
ACTN1-204ENST00000438964 SEPT3Q9UH03 358 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms