RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 KLK3P07288 261 aaPredicted RBP10.97□□□□□ -0.65
RTN4-211ENST00000438462 CAPN1P07384 714 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 MYCLP1P12525 358 aaPredicted RBP10.97□□□□□ -0.65
RTN4-211ENST00000438462 UNGP13051 313 aaPredicted RBP10.97□□□□□ -0.65
RTN4-211ENST00000438462 FOLR1P15328 257 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 PIK3CAP42336 1068 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 LIG3P49916 1009 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 ELP6Q0PNE2 266 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 BST2Q10589 180 aaKnown RBP10.97□□□□□ -0.65
RTN4-211ENST00000438462 LBRQ14739 615 aaKnown RBP10.97□□□□□ -0.65
RTN4-211ENST00000438462 MYLK3Q32MK0 819 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 GDPD4Q6W3E5 623 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 TMEM126BQ8IUX1 230 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 ZZZ3Q8IYH5 903 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 GUF1Q8N442 669 aaKnown RBP10.97□□□□□ -0.65
RTN4-211ENST00000438462 TAB3Q8N5C8 712 aaPredicted RBP10.97□□□□□ -0.65
RTN4-211ENST00000438462 SLC4A11Q8NBS3 891 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 OR7D4Q8NG98 312 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 PHF10Q8WUB8 498 aaKnown RBP10.97□□□□□ -0.65
RTN4-211ENST00000438462 IRGQQ8WZA9 623 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 NACC2Q96BF6 587 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 IP6K3Q96PC2 410 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 CYP3A43Q9HB55 503 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 SLC24A3Q9HC58 644 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.97□□□□□ -0.65
RTN4-211ENST00000438462 RASSF1Q9NS23 344 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 ABI3Q9P2A4 366 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 APEX2Q9UBZ4 518 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 STK17AQ9UEE5 414 aa10.97□□□□□ -0.65
RTN4-211ENST00000438462 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.97□□□□□ -0.65
RTN4-211ENST00000438462 PDE2AO00408 941 aaPredicted RBP10.96□□□□□ -0.65
RTN4-211ENST00000438462 PRAMEF2O60811 474 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 IGHEP01854 428 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 TYRP1P17643 537 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 NELFEP18615 380 aaKnown RBP10.96□□□□□ -0.65
RTN4-211ENST00000438462 XPAP23025 273 aaPredicted RBP10.96□□□□□ -0.65
RTN4-211ENST00000438462 ERCC5P28715 1186 aaPredicted RBP10.96□□□□□ -0.65
RTN4-211ENST00000438462 TRIM23P36406 574 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 CXCR3P49682 368 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 AP3M2P53677 418 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 CDH4P55283 916 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 GSDMDP57764 484 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 DLG4P78352 724 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 ARF5P84085 180 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 AUHQ13825 339 aaKnown RBP10.96□□□□□ -0.65
RTN4-211ENST00000438462 CACHD1Q5VU97 1274 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 AGAP7PQ5VUJ5 663 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 RETSATQ6NUM9 610 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 VWA5B2Q8N398 1253 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 XXYLT1Q8NBI6 393 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 KLHL6Q8WZ60 621 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 SH3KBP1Q96B97 665 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 DNAJC19Q96DA6 116 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 HMCESQ96FZ2 354 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 Q96MF0 132 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 AGAP4Q96P64 663 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 FRMD8Q9BZ67 464 aaPredicted RBP10.96□□□□□ -0.65
RTN4-211ENST00000438462 APOBEC3GQ9HC16 384 aaKnown RBP10.96□□□□□ -0.65
RTN4-211ENST00000438462 AGPAT3Q9NRZ7 376 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 P4HTMQ9NXG6 502 aa10.96□□□□□ -0.65
RTN4-211ENST00000438462 MEN1O00255 615 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 WISP2O76076 250 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 RPN1P04843 607 aaKnown RBP10.95□□□□□ -0.66
RTN4-211ENST00000438462 EBLN1P0CF75 366 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 HOXD13P35453 343 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 UBA7P41226 1012 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 RGS7P49802 495 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 NCF4Q15080 339 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 PCBP2Q15366 365 aaKnown RBP eCLIP10.95□□□□□ -0.66
RTN4-211ENST00000438462 Q6ZPB1 254 aaPredicted RBP10.95□□□□□ -0.66
RTN4-211ENST00000438462 FAM92BQ6ZTR7 304 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 DSELQ8IZU8 1212 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 CPSF7Q8N684 471 aaKnown RBP10.95□□□□□ -0.66
RTN4-211ENST00000438462 SIDT2Q8NBJ9 832 aaKnown RBP10.95□□□□□ -0.66
RTN4-211ENST00000438462 KIAA0895Q8NCT3 520 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 UBA3Q8TBC4 463 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 BDH2Q9BUT1 245 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.95□□□□□ -0.66
RTN4-211ENST00000438462 UCK2Q9BZX2 261 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 NIF3L1Q9GZT8 377 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 ATP13A2Q9NQ11 1180 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 FAM13BQ9NYF5 915 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 PPT2Q9UMR5 302 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 ZNF835Q9Y2P0 537 aa10.95□□□□□ -0.66
RTN4-211ENST00000438462 TRIM64A6NGJ6 449 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 TRIM64BA6NI03 449 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 LILRA5A6NI73 299 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 LDB2O43679 373 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 ALOX12BO75342 701 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 ZMPSTE24O75844 475 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 RECQL5O94762 991 aaPredicted RBP10.94□□□□□ -0.66
RTN4-211ENST00000438462 TOXO94900 526 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 HLA-DRAP01903 254 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 RAD23BP54727 409 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 DCAF7P61962 342 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 ALFQ53S48 1182 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 PLEKHS1Q5SXH7 462 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 ATXN7L2Q5T6C5 722 aaPredicted RBP10.94□□□□□ -0.66
RTN4-211ENST00000438462 SYPL2Q5VXT5 272 aa10.94□□□□□ -0.66
RTN4-211ENST00000438462 C3P1Q6ZMU1 363 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms