RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 FAM198AQ9UFP1 575 aa7.45□□□□□ -1.22
CPSF6-202ENST00000435070 TIMM44O43615 452 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 TBC1D4O60343 1298 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 CYP4B1P13584 511 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 YBX3P16989 372 aaKnown RBP eCLIP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 NMBRP28336 390 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 EIF2DP41214 584 aaKnown RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 OR2B6P58173 313 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 GPLD1P80108 840 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 LIPEQ05469 1076 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 MADCAM1Q13477 382 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 TSTD2Q5T7W7 516 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 NXNL2Q5VZ03 156 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 KRT74Q7RTS7 529 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 P2RY8Q86VZ1 359 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 GMCL1P1Q8NEA9 526 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 MCPH1Q8NEM0 835 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ZHX1-C8orf76Q96EF9 292 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 BDH2Q9BUT1 245 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ELOVL4Q9GZR5 314 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 C12orf4Q9NQ89 552 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PRDM5Q9NQX1 630 aaPredicted RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 A0A1W2PQ72 361 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 C12orf71A8MTZ7 269 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 UPK1BO75841 260 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 DGAT1O75907 488 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 SOAT2O75908 522 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PGLSO95336 258 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 DNTTP04053 509 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 NAT2P11245 290 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 SLC6A2P23975 617 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ARCN1P48444 511 aaKnown RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ATP6V0D1P61421 351 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 TGFB2P61812 414 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PPP2R2BQ00005 443 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 EMX1Q04741 257 aaPredicted RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 FRG1Q14331 258 aaKnown RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 SPESP1Q6UW49 350 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ZNF467Q7Z7K2 595 aaPredicted RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 RBM23Q86U06 439 aaKnown RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 CEP97Q8IW35 865 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 TMEM151AQ8N4L1 468 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 CHDHQ8NE62 594 aaPredicted RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 OR5H6Q8NGV6 325 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 STYXQ8WUJ0 223 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 MCRS1Q96EZ8 462 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 OR2B2Q9GZK3 357 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 TNKS2Q9H2K2 1166 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 SLAMF8Q9P0V8 285 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ACTR3BQ9P1U1 418 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 NDUFAF1Q9Y375 327 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ERVH48-1M5A8F1 160 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 SCO2O43819 266 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 CYP7B1O75881 506 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 SLC35E2BP0CK96 405 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 HTR2BP41595 481 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 SLC26A2P50443 739 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PXDC1Q5TGL8 231 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ARHGAP17Q68EM7 881 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 USP51Q70EK9 711 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PELI3Q8N2H9 469 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ELMO2Q96JJ3 720 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PRDM12Q9H4Q4 367 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 TLR9Q9NR96 1032 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PAK1IP1Q9NWT1 392 aaPredicted RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 MORF4L1Q9UBU8 362 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 KRT87PA6NCN2 255 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 TBKBP1A7MCY6 615 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 H0Y626 953 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 MFSD11O43934 449 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 HS6ST1O60243 411 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 FTH1P02794 183 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PSAPP07602 524 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 CDH5P33151 784 aaPredicted RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 HADHAP40939 763 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PTGER2P43116 358 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 CHRNEQ04844 493 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 TRIP4Q15650 581 aaPredicted RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 CRY1Q16526 586 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 SPANXN3Q5MJ09 141 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 SCIMPQ6UWF3 145 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PDZD4Q76G19 769 aaPredicted RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 GDPD3Q7L5L3 318 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 METTL4Q8N3J2 472 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 DNERQ8NFT8 737 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 MCOLN3Q8TDD5 553 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 CNDP2Q96KP4 475 aaKnown RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 YTHDF1Q9BYJ9 559 aaKnown RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 IL22Q9GZX6 179 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 MAT2BQ9NZL9 334 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 CRNNQ9UBG3 495 aaPredicted RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 SNX6Q9UNH7 406 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 CPNE3O75131 537 aaKnown RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 LYPLA2O95372 231 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PGK1P00558 417 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 APOA1P02647 267 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 CHRNA1P02708 482 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ALDOCP09972 364 aaKnown RBP7.44□□□□□ -1.22
CPSF6-202ENST00000435070 ASPAP45381 313 aa7.44□□□□□ -1.22
CPSF6-202ENST00000435070 PSMD8P48556 350 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms