RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 CTSL3PQ5NE16 218 aa23.66■■□□□ 1.38
MBD3-202ENST00000434436 BNC2Q6ZN30 1099 aaPredicted RBP23.66■■□□□ 1.38
MBD3-202ENST00000434436 TTC16Q8NEE8 873 aa23.66■■□□□ 1.38
MBD3-202ENST00000434436 C3orf30Q96M34 536 aa23.66■■□□□ 1.38
MBD3-202ENST00000434436 PCDHB9Q9Y5E1 797 aa23.66■■□□□ 1.38
MBD3-202ENST00000434436 KIAA1671Q9BY89 1806 aa23.66■■□□□ 1.38
MBD3-202ENST00000434436 PKMP14618 531 aaKnown RBP23.65■■□□□ 1.38
MBD3-202ENST00000434436 THOP1P52888 689 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 CYP4F8P98187 520 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 RAD51Q06609 339 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 LARP4Q71RC2 724 aaKnown RBP eCLIP23.65■■□□□ 1.38
MBD3-202ENST00000434436 FAM217AQ8IXS0 508 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 APCDD1Q8J025 514 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 WDR41Q9HAD4 459 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 MRPL17Q9NRX2 175 aaKnown RBP23.65■■□□□ 1.38
MBD3-202ENST00000434436 H7C0S8 307 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 CDC7O00311 574 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 NIPSNAP2O75323 286 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 GFAPP14136 432 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 ITGB8P26012 769 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 CDH18Q13634 790 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 PTK2BQ14289 1009 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 SQLEQ14534 574 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 TSNQ15631 228 aaKnown RBP23.65■■□□□ 1.38
MBD3-202ENST00000434436 ZNF423Q2M1K9 1284 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 ZRANB3Q5FWF4 1079 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 RAB44Q7Z6P3 723 aaPredicted RBP23.65■■□□□ 1.38
MBD3-202ENST00000434436 CMTR2Q8IYT2 770 aaKnown RBP23.65■■□□□ 1.38
MBD3-202ENST00000434436 CLYBLQ8N0X4 340 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 STAG3L4Q8TBR4 150 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 EID2BQ96D98 161 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 CRISPLD2Q9H0B8 497 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 BATF3Q9NR55 127 aa23.65■■□□□ 1.38
MBD3-202ENST00000434436 CFLARO15519 480 aa23.64■■□□□ 1.38
MBD3-202ENST00000434436 LILRB3O75022 631 aa23.64■■□□□ 1.38
MBD3-202ENST00000434436 TTPAP49638 278 aa23.64■■□□□ 1.38
MBD3-202ENST00000434436 XIAPP98170 497 aa23.64■■□□□ 1.38
MBD3-202ENST00000434436 PABPC1LQ4VXU2 614 aaKnown RBP23.64■■□□□ 1.38
MBD3-202ENST00000434436 GAREM2Q75VX8 874 aa23.64■■□□□ 1.38
MBD3-202ENST00000434436 ITIH5Q86UX2 942 aa23.64■■□□□ 1.38
MBD3-202ENST00000434436 KBTBD6Q86V97 674 aa23.64■■□□□ 1.38
MBD3-202ENST00000434436 DCAF4L2Q8NA75 395 aa23.64■■□□□ 1.38
MBD3-202ENST00000434436 SERPINI1Q99574 410 aa23.64■■□□□ 1.38
MBD3-202ENST00000434436 ZNF184Q99676 751 aaPredicted RBP23.64■■□□□ 1.38
MBD3-202ENST00000434436 RNF112Q9ULX5 631 aa23.64■■□□□ 1.38
MBD3-202ENST00000434436 ATP6AP2A0A1C7CYW4 349 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 TYW5A2RUC4 315 aaKnown RBP23.64■■□□□ 1.37
MBD3-202ENST00000434436 SUPT3HB4E1H0 165 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 STX16-NPEPL1H3BU86 382 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 SUPT3HO75486 399 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 ECI2O75521 394 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 ATP6AP2O75787 350 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 FGF4P08620 206 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 RFC2P35250 354 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 PKNOX1P55347 436 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 ATP6V0D1P61421 351 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 ART3Q13508 389 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 CEACAM7Q14002 265 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 DHDDSQ86SQ9 333 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 C19orf60Q96EN9 201 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 ASB2Q96Q27 587 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 MID1IP1Q9NPA3 183 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 HACD3Q9P035 362 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 IL17CQ9P0M4 197 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 VPS9D1Q9Y2B5 631 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 DNAJC15Q9Y5T4 150 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 ANKRD12Q6UB98 2062 aa23.64■■□□□ 1.37
MBD3-202ENST00000434436 GPR39O43194 453 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 GPC4O75487 556 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 BMP1P13497 986 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 CTPS1P17812 591 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 GABRR2P28476 465 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 FOXA1P55317 472 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 WDR5P61964 334 aaKnown RBP23.63■■□□□ 1.37
MBD3-202ENST00000434436 BLMHQ13867 455 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 SIDT2Q8NBJ9 832 aaKnown RBP23.63■■□□□ 1.37
MBD3-202ENST00000434436 USP13Q92995 863 aaPredicted RBP23.63■■□□□ 1.37
MBD3-202ENST00000434436 TM6SF2Q9BZW4 377 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 FBRSL1Q9HCM7 1045 aaKnown RBP23.63■■□□□ 1.37
MBD3-202ENST00000434436 LRCH1Q9Y2L9 728 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 ZNF711Q9Y462 761 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 NPEPPSL1A6NEC2 478 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 EIF4E1BA6NMX2 242 aaKnown RBP23.63■■□□□ 1.37
MBD3-202ENST00000434436 H3BNX3 289 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 SMAD6O43541 496 aaKnown RBP23.63■■□□□ 1.37
MBD3-202ENST00000434436 CLASP2O75122 1294 aaKnown RBP23.63■■□□□ 1.37
MBD3-202ENST00000434436 TSPAN12O95859 305 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 CLTBP09497 229 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 XRCC1P18887 633 aaPredicted RBP23.63■■□□□ 1.37
MBD3-202ENST00000434436 FASTKQ14296 549 aaKnown RBP23.63■■□□□ 1.37
MBD3-202ENST00000434436 MFN1Q8IWA4 741 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 HS6ST3Q8IZP7 471 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 FBXO39Q8N4B4 442 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 FUBP1Q96AE4 644 aaKnown RBP23.63■■□□□ 1.37
MBD3-202ENST00000434436 ADAMTS6Q9UKP5 1117 aa23.63■■□□□ 1.37
MBD3-202ENST00000434436 PSMD12O00232 456 aaPredicted RBP23.62■■□□□ 1.37
MBD3-202ENST00000434436 NRG2O14511 850 aaPredicted RBP23.62■■□□□ 1.37
MBD3-202ENST00000434436 VPS26AO75436 327 aa23.62■■□□□ 1.37
MBD3-202ENST00000434436 PYGLP06737 847 aa23.62■■□□□ 1.37
MBD3-202ENST00000434436 ALPIP09923 528 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms