RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 EXD1Q8NHP7 514 aa16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 LRRN4Q8WUT4 740 aa16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 USP7Q93009 1102 aa16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 OR2M4Q96R27 311 aa16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 AGAP2Q99490 1192 aa16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 RIOK2Q9BVS4 552 aaKnown RBP16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 TDRD1Q9BXT4 1180 aaKnown RBP16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 SEMA4CQ9C0C4 833 aa16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 B3GNT4Q9C0J1 378 aa16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 CDH19Q9H159 772 aa16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 HAUS2Q9NVX0 235 aa16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 WDR70Q9NW82 654 aa16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 DNPEPQ9ULA0 475 aa16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 RPL26L1Q9UNX3 145 aaKnown RBP16.09■□□□□ 0.17
AC055876.3-201ENST00000431496 CLDN7O95471 211 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 LIPCP11150 499 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 CA4P22748 312 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 ACTR1BP42025 376 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 MAPK10P53779 464 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 ACTR1AP61163 376 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 GBE1Q04446 702 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 BIRC2Q13490 618 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 SQSTM1Q13501 440 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 TRIM74Q86UV6 250 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 ZFAND4Q86XD8 727 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 COX14Q96I36 57 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 LYSMD1Q96S90 227 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 NUDT22Q9BRQ3 303 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 PACSIN1Q9BY11 444 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 PCDH9Q9HC56 1237 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 FOXJ2Q9P0K8 574 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 AKAP7Q9P0M2 348 aaPredicted RBP16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 SEPT10Q9P0V9 454 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 LCMT1Q9UIC8 334 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 TTLL3Q9Y4R7 772 aa16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.08■□□□□ 0.16
AC055876.3-201ENST00000431496 IGHV5-10-1A0A0J9YXX1 117 aa16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 C9orf172C9J069 976 aa16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 HGSO14964 777 aaPredicted RBP16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 HLA-DQB2P05538 268 aa16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 CCL4P13236 92 aa16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 KDELR1P24390 212 aa16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 LIMK2P53671 638 aa16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 SLC18A3Q16572 532 aa16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 MARK2Q7KZI7 788 aaKnown RBP16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 CCDC13Q8IYE1 715 aa16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 CCNYQ8ND76 341 aa16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 CTNNBL1Q8WYA6 563 aaPredicted RBP16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 RAPGEF5Q92565 580 aa16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 MED8Q96G25 268 aa16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 DTLQ9NZJ0 730 aa16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 CNOT6Q9ULM6 557 aaKnown RBP16.07■□□□□ 0.16
AC055876.3-201ENST00000431496 TENM4Q6N022 2769 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 IGHV1OR21-1A0A087WYE8 117 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 ANKRD66B4E2M5 251 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 INPP4BO15327 924 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 JCHAINP01591 159 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 CD82P27701 267 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 MAN1A1P33908 653 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 SRSF6Q13247 344 aaKnown RBP16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 TRA2AQ13595 282 aaKnown RBP eCLIP16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 LRP8Q14114 963 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 ASTE1Q2TB18 679 aaPredicted RBP16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 TMEM164Q5U3C3 297 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 NKAIN2Q5VXU1 208 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 DTX1Q86Y01 620 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 GALNT13Q8IUC8 556 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 RCBTB1Q8NDN9 531 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 LPCAT1Q8NF37 534 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 OR4D9Q8NGE8 314 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 OR8K1Q8NGG5 319 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 HDAC11Q96DB2 347 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 SGF29Q96ES7 293 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 CCDC74BQ96LY2 380 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 RNF157Q96PX1 679 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 WDR24Q96S15 920 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 XPO4Q9C0E2 1151 aaKnown RBP16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 ZNHIT2Q9UHR6 403 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 PCDHB11Q9Y5F2 797 aa16.06■□□□□ 0.16
AC055876.3-201ENST00000431496 ASH1LQ9NR48 2969 aaKnown RBP16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 TRBV23OR9-2A0A075B6M9 112 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 RGSL1A5PLK6 1076 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 DNAJC6O75061 913 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 ZIC2O95409 532 aaPredicted RBP16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 ASMTLO95671 621 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 TPM3P06753 285 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 MMP2P08253 660 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 FGF3P11487 239 aaPredicted RBP16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 CD86P42081 329 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 SPINT3P49223 89 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 QPCTQ16769 361 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 MANEAQ5SRI9 462 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 ZFYVE27Q5T4F4 411 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 CNTD1Q8N815 330 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 TAAR9Q96RI9 348 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 DNAJC7Q99615 494 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 DPYSL5Q9BPU6 564 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 MLPHQ9BV36 600 aaPredicted RBP16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 FAM83DQ9H4H8 585 aa16.05■□□□□ 0.16
AC055876.3-201ENST00000431496 KCNK4Q9NYG8 393 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms