RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 ZNF558Q96NG5 402 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 CSPG4P5Q96PW8 444 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 MMS19Q96T76 1030 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 PI4K2AQ9BTU6 479 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 WWP1Q9H0M0 922 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 Q9H521 79 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 NRIP3Q9NQ35 241 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 AHSPQ9NZD4 102 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 VAPAQ9P0L0 249 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 DNAJB11Q9UBS4 358 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 SEPT9Q9UHD8 586 aaPredicted RBP5.36□□□□□ -1.55
PTPN4-203ENST00000430976 HAO1Q9UJM8 370 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 ADAMTS6Q9UKP5 1117 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 TSPAN16Q9UKR8 245 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 CYP8B1Q9UNU6 501 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 WASF3Q9UPY6 502 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 POLR3HQ9Y535 204 aaPredicted RBP5.36□□□□□ -1.55
PTPN4-203ENST00000430976 KLK4Q9Y5K2 254 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 HRH3Q9Y5N1 445 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 KCNE2Q9Y6J6 123 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 SOS2Q07890 1332 aaPredicted RBP5.36□□□□□ -1.55
PTPN4-203ENST00000430976 TEX51A0A1B0GUA7 166 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 GIPC1O14908 333 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 MAFKO60675 156 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 PSMD10O75832 226 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 ZDHHC11BP0C7U3 371 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 PPP3CBP16298 524 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 YBX3P16989 372 aaKnown RBP eCLIP5.36□□□□□ -1.55
PTPN4-203ENST00000430976 CYP3A5P20815 502 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 SERPINF1P36955 418 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 NNMTP40261 264 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 CDKN2CP42773 168 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 CEBPGP53567 150 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 HERVK_113P63132 956 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 UBE2IP63279 158 aaKnown RBP5.36□□□□□ -1.55
PTPN4-203ENST00000430976 NOMO3P69849 1222 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 CD300CQ08708 224 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 GRB10Q13322 594 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 MED21Q13503 144 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 NOMO1Q15155 1222 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 TGFBIQ15582 683 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 KLHL12Q53G59 568 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 PLA1AQ53H76 456 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 MFSD7Q6UXD7 560 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 ETV3LQ6ZN32 361 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 SZRD1Q7Z422 152 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 LINC00523Q86TU6 105 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 TAC4Q86UU9 113 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 ZC3H7AQ8IWR0 971 aaKnown RBP5.36□□□□□ -1.55
PTPN4-203ENST00000430976 FBXW8Q8N3Y1 598 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 FBXL6Q8N531 539 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 MEIOBQ8N635 442 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 TBC1D15Q8TC07 691 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 GAB3Q8WWW8 586 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 DPF2Q92785 391 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 HLA-CQ95604 372 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 REPS1Q96D71 796 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 OTUB1Q96FW1 271 aaPredicted RBP5.36□□□□□ -1.55
PTPN4-203ENST00000430976 SERPINB12Q96P63 405 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 PANX1Q96RD7 426 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 EBF3Q9H4W6 596 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 ZNF395Q9H8N7 513 aaPredicted RBP5.36□□□□□ -1.55
PTPN4-203ENST00000430976 TRPC5Q9UL62 973 aaPredicted RBP5.36□□□□□ -1.55
PTPN4-203ENST00000430976 TLR6Q9Y2C9 796 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 PRG3Q9Y2Y8 225 aaPredicted RBP5.36□□□□□ -1.55
PTPN4-203ENST00000430976 NUMBLQ9Y6R0 609 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 VPS8Q8N3P4 1428 aa5.36□□□□□ -1.55
PTPN4-203ENST00000430976 ADGRA2Q96PE1 1338 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 PRAMEF27A3QJZ7 478 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 FAM172BPA6NC97 362 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 PRAMEF25A6NGN4 478 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ERI2A8K979 691 aaKnown RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 PRAMEF26H0Y7S4 382 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 FOXN1O15353 648 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 COCHO43405 550 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 PRAMEF4O60810 478 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 PRAMEF11O60813 436 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 CSDE1O75534 798 aaKnown RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 BMP15O95972 392 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 RBP1P09455 135 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 OR8G3PP0DMU2 310 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ACADLP28330 430 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 CXCR5P32302 372 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 GP5P40197 560 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 CCR10P46092 362 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 GPX6P59796 221 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 SRSF11Q05519 484 aaKnown RBP5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ZP2Q05996 745 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 FGL2Q14314 439 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 INPP5AQ14642 412 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 TAB1Q15750 504 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ARHGAP40Q5TG30 622 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 PRAMEF5Q5TYX0 476 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 PRAMEF9Q5VWM5 478 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 PRAMEF6Q5VXH4 476 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 FOXB2Q5VYV0 432 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 DENND2CQ68D51 928 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 ARHGAP17Q68EM7 881 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 OGFOD2Q6N063 350 aa5.35□□□□□ -1.55
PTPN4-203ENST00000430976 PGBD2Q6P3X8 592 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms