RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 TTC13Q8NBP0 860 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.11□□□□□ -0.79
ATG4B-212ENST00000430617 FAM174AQ8TBP5 190 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 ACTL9Q8TC94 416 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 AZIN2Q96A70 460 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 HAUS1Q96CS2 278 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 TBC1D31Q96DN5 1066 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 TCTN2Q96GX1 697 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 OLFM3Q96PB7 478 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 KLF6Q99612 283 aaPredicted RBP10.11□□□□□ -0.79
ATG4B-212ENST00000430617 FAM118BQ9BPY3 351 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 SLC17A9Q9BYT1 436 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 FRMD8P1Q9BZ68 369 aaPredicted RBP10.11□□□□□ -0.79
ATG4B-212ENST00000430617 KLC2Q9H0B6 622 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 ANKZF1Q9H8Y5 726 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 SPASTQ9UBP0 616 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 ZNF212Q9UDV6 495 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 OR12D3Q9UGF7 316 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 APOBEC3BQ9UH17 382 aaKnown RBP10.11□□□□□ -0.79
ATG4B-212ENST00000430617 PCYOX1Q9UHG3 505 aa10.11□□□□□ -0.79
ATG4B-212ENST00000430617 IPO11Q9UI26 975 aaKnown RBP10.11□□□□□ -0.79
ATG4B-212ENST00000430617 UQCRHLA0A096LP55 91 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 ZNF891A8MT65 544 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 WASH4PA8MWX3 477 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 KPNA3O00505 521 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 FGF10O15520 208 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 UQCRHP07919 91 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 ANXA6P08133 673 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 ZFXP17010 805 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 ERCC2P18074 760 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 AMPD1P23109 780 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 COILP38432 576 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 NNMTP40261 264 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 RABIFP47224 123 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 ATP1A2P50993 1020 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 TUBB4BP68371 445 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 AUHQ13825 339 aaKnown RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 DHX34Q14147 1143 aaKnown RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 NAA30Q147X3 362 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 ERCC6LQ2NKX8 1250 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 EIF2S3LQ2VIR3 472 aaKnown RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 DEFB109BQ30KR1 87 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 ACBD5Q5T8D3 534 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 ATP1A1-AS1Q5TC04 95 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 RAP1GAP2Q684P5 730 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 CCDC137Q6PK04 289 aaKnown RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 NLRP14Q86W24 1093 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 SLITRK4Q8IW52 837 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 UNC45BQ8IWX7 931 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 PHACTR4Q8IZ21 702 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 ARL10Q8N8L6 244 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 Q8N9G6 341 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 CPT1CQ8TCG5 803 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 PDCD6IPQ8WUM4 868 aaKnown RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 APOBEC4Q8WW27 367 aaKnown RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 MAGOHBQ96A72 148 aaKnown RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 TMEM159Q96B96 161 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 POM121Q96HA1 1249 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 RUNDC3BQ96NL0 473 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 QKIQ96PU8 341 aaKnown RBP eCLIP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 CMKLR1Q99788 373 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 LRRC1Q9BTT6 524 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 SEMA6CQ9H3T2 930 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 PRDM8Q9NQV8 689 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 HOMER3Q9NSC5 361 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 DTLQ9NZJ0 730 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 SAE1Q9UBE0 346 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 PPARGC1AQ9UBK2 798 aaKnown RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 AMACRQ9UHK6 382 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 DNPEPQ9ULA0 475 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 NEU2Q9Y3R4 380 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 RNF215Q9Y6U7 377 aa10.1□□□□□ -0.79
ATG4B-212ENST00000430617 MDC1Q14676 2089 aaKnown RBP10.1□□□□□ -0.79
ATG4B-212ENST00000430617 CCDC168Q8NDH2 2452 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 NIPBLQ6KC79 2804 aaeCLIP10.09□□□□□ -0.79
ATG4B-212ENST00000430617 DRGXA6NNA5 263 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 TTLL8A6PVC2 850 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 EFCAB7A8K855 629 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 ALOX15BO15296 676 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 TTI1O43156 1089 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 ATP9BO43861 1147 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 CNTN5O94779 1100 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 LDLRP01130 860 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 TACR2P21452 398 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 EPHB2P29323 1055 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 MRPS25P82663 173 aaKnown RBP10.09□□□□□ -0.79
ATG4B-212ENST00000430617 DR1Q01658 176 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 CDC20Q12834 499 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 SLC10A2Q12908 348 aaPredicted RBP10.09□□□□□ -0.79
ATG4B-212ENST00000430617 DLG2Q15700 870 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 GLE1Q53GS7 698 aaKnown RBP10.09□□□□□ -0.79
ATG4B-212ENST00000430617 PHF19Q5T6S3 580 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 AFMIDQ63HM1 303 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 FBXL22Q6P050 247 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 CHSY1Q86X52 802 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 CIR1Q86X95 450 aaPredicted RBP10.09□□□□□ -0.79
ATG4B-212ENST00000430617 CCNJLQ8IV13 435 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 SFTPA2Q8IWL1 248 aa10.09□□□□□ -0.79
ATG4B-212ENST00000430617 ARHGAP12Q8IWW6 846 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms