RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 SLCO2A1Q92959 643 aa10.12□□□□□ -0.79
ATG4B-211ENST00000429899 RNF34Q969K3 372 aa10.12□□□□□ -0.79
ATG4B-211ENST00000429899 BTN2A3PQ96KV6 586 aa10.12□□□□□ -0.79
ATG4B-211ENST00000429899 C1orf74Q96LT6 269 aa10.12□□□□□ -0.79
ATG4B-211ENST00000429899 KRT12Q99456 494 aa10.12□□□□□ -0.79
ATG4B-211ENST00000429899 EPAS1Q99814 870 aa10.12□□□□□ -0.79
ATG4B-211ENST00000429899 ETNK2Q9NVF9 386 aa10.12□□□□□ -0.79
ATG4B-211ENST00000429899 SIRPGQ9P1W8 387 aa10.12□□□□□ -0.79
ATG4B-211ENST00000429899 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.12□□□□□ -0.79
ATG4B-211ENST00000429899 IPO11Q9UI26 975 aaKnown RBP10.12□□□□□ -0.79
ATG4B-211ENST00000429899 MFHAS1Q9Y4C4 1052 aa10.12□□□□□ -0.79
ATG4B-211ENST00000429899 V9GYY5 206 aaPredicted RBP10.12□□□□□ -0.79
ATG4B-211ENST00000429899 DCHS2Q6V1P9 2916 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 PCSK5Q92824 1860 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 IGLV3-10A0A075B6K4 115 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 C1QTNF3-AMACRE9PGA6 284 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 HNRNPRO43390 633 aaKnown RBP10.11□□□□□ -0.79
ATG4B-211ENST00000429899 RAD51CO43502 376 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 CREB3O43889 395 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 BNIP3LO60238 219 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 TSHRP16473 764 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 OAS2P29728 719 aaKnown RBP10.11□□□□□ -0.79
ATG4B-211ENST00000429899 UGT1A3P35503 534 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 PTGIRP43119 386 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 SLC11A2P49281 568 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 IRAK1P51617 712 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 OTUD4Q01804 1114 aaKnown RBP10.11□□□□□ -0.79
ATG4B-211ENST00000429899 GBE1Q04446 702 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 CDC20Q12834 499 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 C16orf72Q14CZ0 275 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 PAFAH1B3Q15102 231 aaKnown RBP10.11□□□□□ -0.79
ATG4B-211ENST00000429899 TCEA2Q15560 299 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 CCNG2Q16589 344 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 C5orf22Q49AR2 442 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 ACCSLQ4AC99 568 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 ESRP1Q6NXG1 681 aaKnown RBP10.11□□□□□ -0.79
ATG4B-211ENST00000429899 C8orf74Q6P047 294 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 NPNTQ6UXI9 565 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 ASB18Q6ZVZ8 466 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 TIPARPQ7Z3E1 657 aaKnown RBP10.11□□□□□ -0.79
ATG4B-211ENST00000429899 KLHL7Q8IXQ5 586 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 NPWQ8N729 165 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 TTC13Q8NBP0 860 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 FAM174AQ8TBP5 190 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 ACTL9Q8TC94 416 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 AZIN2Q96A70 460 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 HAUS1Q96CS2 278 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 TBC1D31Q96DN5 1066 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 OLFM3Q96PB7 478 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 KLF6Q99612 283 aaPredicted RBP10.11□□□□□ -0.79
ATG4B-211ENST00000429899 CMKLR1Q99788 373 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 FAM118BQ9BPY3 351 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 SLC17A9Q9BYT1 436 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 FRMD8P1Q9BZ68 369 aaPredicted RBP10.11□□□□□ -0.79
ATG4B-211ENST00000429899 KLC2Q9H0B6 622 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 ANKZF1Q9H8Y5 726 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 SPASTQ9UBP0 616 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 ZNF212Q9UDV6 495 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 OR12D3Q9UGF7 316 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 APOBEC3BQ9UH17 382 aaKnown RBP10.11□□□□□ -0.79
ATG4B-211ENST00000429899 PCYOX1Q9UHG3 505 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 GGT7Q9UJ14 662 aa10.11□□□□□ -0.79
ATG4B-211ENST00000429899 UQCRHLA0A096LP55 91 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 WASH4PA8MWX3 477 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 KPNA3O00505 521 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 FGF10O15520 208 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 UQCRHP07919 91 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 ANXA6P08133 673 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 ZFXP17010 805 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 ERCC2P18074 760 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 AMPD1P23109 780 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 COILP38432 576 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 NNMTP40261 264 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 RABIFP47224 123 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 TUBB4BP68371 445 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 AUHQ13825 339 aaKnown RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 DHX34Q14147 1143 aaKnown RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 ERCC6LQ2NKX8 1250 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 PHF19Q5T6S3 580 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 ACBD5Q5T8D3 534 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 ATP1A1-AS1Q5TC04 95 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 RAP1GAP2Q684P5 730 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 CCDC137Q6PK04 289 aaKnown RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 NLRP14Q86W24 1093 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 SLITRK4Q8IW52 837 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 UNC45BQ8IWX7 931 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 PHACTR4Q8IZ21 702 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 CACNA2D3Q8IZS8 1091 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 ARL10Q8N8L6 244 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 Q8N9G6 341 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 GPBAR1Q8TDU6 330 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 MAGOHBQ96A72 148 aaKnown RBP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 TMEM159Q96B96 161 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 RUNDC3BQ96NL0 473 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 QKIQ96PU8 341 aaKnown RBP eCLIP10.1□□□□□ -0.79
ATG4B-211ENST00000429899 LRRC1Q9BTT6 524 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 SEMA6CQ9H3T2 930 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 HOMER3Q9NSC5 361 aa10.1□□□□□ -0.79
ATG4B-211ENST00000429899 DTLQ9NZJ0 730 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms