RNA–Protein interactions for RNA: ENST00000427561.5

UBA1-205, Transcript of ubiquitin like modifier activating enzyme 1, human

TSL 5

Gene UBA1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA1-205	ENST00000427561	DUX1	O43812	170 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	FZD6	O60353	706 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	RAD1	O60671	282 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	ASMTL	O95671	621 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	SOD1	P00441	154 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	TRBC1	P01850	177 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	LIF	P15018	202 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	CSF2RB	P32927	897 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	EPHB1	P54762	984 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	RAB15	P59190	212 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	PTS	Q03393	145 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	LRP8	Q14114	963 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	PIGH	Q14442	188 aa	Predicted RBP	13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	FILIP1L	Q4L180	1135 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	RFLNA	Q6ZTI6	216 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	MARK2	Q7KZI7	788 aa	Known RBP	13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	GALNT13	Q8IUC8	556 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	NRSN1	Q8IZ57	195 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	TEX26	Q8N6G2	289 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	EXD1	Q8NHP7	514 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	SLC37A2	Q8TED4	501 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	TEKT4	Q8WW24	435 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	SCAMP4	Q969E2	229 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	CATSPER2	Q96P56	530 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	TEFM	Q96QE5	360 aa	Known RBP	13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	ANP32E	Q9BTT0	268 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	NAT10	Q9H0A0	1025 aa	Known RBP	13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	ISCU	Q9H1K1	167 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	PIEZO2	Q9H5I5	2752 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	TMEM9	Q9P0T7	183 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561	TENM4	Q6N022	2769 aa		13.6	□□□□□ -0.23
UBA1-205	ENST00000427561		A0A0U1RQS6	177 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	ZNF891	A8MT65	544 aa	Predicted RBP	13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	TCF4	P15884	667 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	CES1	P23141	567 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	MAN1A1	P33908	653 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	CCR10	P46092	362 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	TLE1	Q04724	770 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	CCDC183	Q5T5S1	534 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	ANKS6	Q68DC2	871 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	TRIM74	Q86UV6	250 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	ZNF761	Q86XN6	746 aa	Predicted RBP	13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	RAVER1	Q8IY67	606 aa	Known RBP	13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	SFRP1	Q8N474	314 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	SH3KBP1	Q96B97	665 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	COX14	Q96I36	57 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	AGAP2	Q99490	1192 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	POLR1E	Q9GZS1	481 aa	Known RBP	13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	STN1	Q9H668	368 aa	Known RBP	13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	PCDH18	Q9HCL0	1135 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	TMEM63C	Q9P1W3	806 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	ZNHIT2	Q9UHR6	403 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	TUBD1	Q9UJT1	453 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561	DNPEP	Q9ULA0	475 aa		13.59	□□□□□ -0.23
UBA1-205	ENST00000427561		A8MU76	341 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	INPP4B	O15327	924 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	SKIL	P12757	684 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	MAP4	P27816	1152 aa	Known RBP	13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	STC1	P52823	247 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	POLE2	P56282	527 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	HHEX	Q03014	270 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	KCNAB2	Q13303	367 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	KRT81	Q14533	505 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	SNAP47	Q5SQN1	464 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	CCDC122	Q5T0U0	273 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	E4F1	Q66K89	784 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	TXNRD3NB	Q6F5E7	133 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	WDR74	Q6RFH5	385 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	CEACAM20	Q6UY09	585 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	ARHGAP22	Q7Z5H3	698 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	PTRH1	Q86Y79	214 aa	Known RBP	13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	NLGN4X	Q8N0W4	816 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	BMPER	Q8N8U9	685 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	SLC45A3	Q96JT2	553 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	SMIM14	Q96QK8	99 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	EFHD1	Q9BUP0	239 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	RIOK2	Q9BVS4	552 aa	Known RBP	13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	HAUS2	Q9NVX0	235 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	VPS18	Q9P253	973 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	IP6K2	Q9UHH9	426 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	PILRA	Q9UKJ1	303 aa		13.58	□□□□□ -0.24
UBA1-205	ENST00000427561	SMTNL1	A8MU46	457 aa		13.57	□□□□□ -0.24
UBA1-205	ENST00000427561	DNAJC6	O75061	913 aa		13.57	□□□□□ -0.24
UBA1-205	ENST00000427561	MAP3K6	O95382	1288 aa		13.57	□□□□□ -0.24
UBA1-205	ENST00000427561	SLC2A4	P14672	509 aa		13.57	□□□□□ -0.24
UBA1-205	ENST00000427561	CA4	P22748	312 aa		13.57	□□□□□ -0.24
UBA1-205	ENST00000427561	MC2R	Q01718	297 aa		13.57	□□□□□ -0.24
UBA1-205	ENST00000427561	COLEC12	Q5KU26	742 aa		13.57	□□□□□ -0.24
UBA1-205	ENST00000427561	ALG1L	Q6GMV1	187 aa		13.57	□□□□□ -0.24
UBA1-205	ENST00000427561	TIGD7	Q6NT04	549 aa	Predicted RBP	13.57	□□□□□ -0.24
UBA1-205	ENST00000427561	CHST15	Q7LFX5	561 aa	Predicted RBP	13.57	□□□□□ -0.24
UBA1-205	ENST00000427561	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
UBA1-205	ENST00000427561	NIPA2	Q8N8Q9	360 aa		13.57	□□□□□ -0.24
UBA1-205	ENST00000427561	NCSTN	Q92542	709 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms