RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 FAM207AQ9NSI2 230 aaPredicted RBP14.56□□□□□ -0.08
PDAP1-202ENST00000426447 CNOT8Q9UFF9 292 aaKnown RBP14.56□□□□□ -0.08
PDAP1-202ENST00000426447 TLK1Q9UKI8 766 aa14.56□□□□□ -0.08
PDAP1-202ENST00000426447 NPIPB15A6NHN6 443 aaPredicted RBP14.55□□□□□ -0.08
PDAP1-202ENST00000426447 EIF3CLB5ME19 914 aaKnown RBP14.55□□□□□ -0.08
PDAP1-202ENST00000426447 SNX2O60749 519 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 RFPL1O75677 317 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 CTPS1P17812 591 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 F8A1P23610 371 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 KLK7P49862 253 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 PTPRRQ15256 657 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 CA9Q16790 459 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 TCP11X2Q5H9J9 407 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 PPP6R3Q5H9R7 873 aaPredicted RBP14.55□□□□□ -0.08
PDAP1-202ENST00000426447 ERMARDQ5T6L9 678 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 ADAMTSL4Q6UY14 1074 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 USP45Q70EL2 814 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 CHST15Q7LFX5 561 aaPredicted RBP14.55□□□□□ -0.08
PDAP1-202ENST00000426447 TSPAN33Q86UF1 283 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 PLXDC1Q8IUK5 500 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 BBS5Q8N3I7 341 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 GALNT11Q8NCW6 608 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 SPOCK2Q92563 424 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 ZNF599Q96NL3 588 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 NUDCD1Q96RS6 583 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 EIF3CQ99613 913 aaKnown RBP14.55□□□□□ -0.08
PDAP1-202ENST00000426447 ABCG8Q9H221 673 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 NOD2Q9HC29 1040 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 SARS2Q9NP81 518 aaKnown RBP14.55□□□□□ -0.08
PDAP1-202ENST00000426447 SAMSN1Q9NSI8 373 aaKnown RBP14.55□□□□□ -0.08
PDAP1-202ENST00000426447 TAB2Q9NYJ8 693 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 PCSK1NQ9UHG2 260 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 CROTQ9UKG9 612 aa14.55□□□□□ -0.08
PDAP1-202ENST00000426447 NBASA2RRP1 2371 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 PIPSLA2A3N6 862 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 CDC14CA4D256 554 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 EML2O95834 649 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 PYGLP06737 847 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 TPM2P07951 284 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 CCNYL3P0C7X3 344 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 HSPA9P38646 679 aaKnown RBP14.54□□□□□ -0.08
PDAP1-202ENST00000426447 EPHA4P54764 986 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 JAM2P57087 298 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 ARMC12Q5T9G4 340 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 CAPRIN2Q6IMN6 1127 aaKnown RBP14.54□□□□□ -0.08
PDAP1-202ENST00000426447 IYDQ6PHW0 289 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 MON1BQ7L1V2 547 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 TECPR1Q7Z6L1 1165 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 RASGRP3Q8IV61 690 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 NPWQ8N729 165 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 GALNT6Q8NCL4 622 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 EXD1Q8NHP7 514 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 CPT1CQ8TCG5 803 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 NSMCE1Q8WV22 266 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 SCAMP4Q969E2 229 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 STAMBPL1Q96FJ0 436 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 PCMTD1Q96MG8 357 aaPredicted RBP14.54□□□□□ -0.08
PDAP1-202ENST00000426447 TWSG1Q9GZX9 223 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 DACH1Q9UI36 760 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 KCND3Q9UK17 655 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 PRKAB1Q9Y478 270 aa14.54□□□□□ -0.08
PDAP1-202ENST00000426447 USP9YO00507 2555 aaPredicted RBP14.54□□□□□ -0.08
PDAP1-202ENST00000426447 A0A0U1RQS6 177 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 TCRBV5S1A1TA0A578 114 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 FURINP09958 794 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 SLC2A4P14672 509 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 ZNF28P17035 718 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 PSMA2P25787 234 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 EEF1GP26641 437 aaKnown RBP14.53□□□□□ -0.08
PDAP1-202ENST00000426447 OGDHQ02218 1023 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 TRAF2Q12933 501 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 BECN1Q14457 450 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 FKBP15Q5T1M5 1219 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 RFLNAQ6ZTI6 216 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 ELMO2Q96JJ3 720 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 KCTD15Q96SI1 283 aaPredicted RBP14.53□□□□□ -0.08
PDAP1-202ENST00000426447 TBC1D10AQ9BXI6 508 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 EPB41L1Q9H4G0 881 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 TBC1D29Q9UFV1 150 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 KCNK6Q9Y257 313 aa14.53□□□□□ -0.08
PDAP1-202ENST00000426447 A1L4Q6 167 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 PRPSAP2O60256 369 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 RNF8O76064 485 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 KIAA0754O94854 1291 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 PGLSO95336 258 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 SOD1P00441 154 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 ATP1A1P05023 1023 aaKnown RBP14.52□□□□□ -0.09
PDAP1-202ENST00000426447 TNFAIP3P21580 790 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 SEPHS1P49903 392 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 MAXP61244 160 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 DPCR1Q3MIW9 517 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 PPP1R15BQ5SWA1 713 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 LRRC66Q68CR7 880 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 LYSMD3Q7Z3D4 306 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 TMEM135Q86UB9 458 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 TP53INP2Q8IXH6 220 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 PGBD5Q8N414 524 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 OR6C1Q96RD1 312 aa14.52□□□□□ -0.09
PDAP1-202ENST00000426447 MCCC1Q96RQ3 725 aaPredicted RBP14.52□□□□□ -0.09
PDAP1-202ENST00000426447 AGAP2Q99490 1192 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms