RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 REP15Q6BDI9 236 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 ZFP1Q6P2D0 407 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 SLC22A9Q8IVM8 553 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 OR13C4Q8NGS5 318 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 HMGCLL1Q8TB92 370 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 FAM81AQ8TBF8 368 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 ARRDC2Q8TBH0 407 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 POF1BQ8WVV4 589 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 PTERQ96BW5 349 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 BTN2A3PQ96KV6 586 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 UBXN10Q96LJ8 280 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 SLC39A3Q9BRY0 314 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 SEMA6AQ9H2E6 1030 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 GSTO2Q9H4Y5 243 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 MEAF6Q9HAF1 191 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 CACNA2D2Q9NY47 1150 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 EPS15L1Q9UBC2 864 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 GIMAP2Q9UG22 337 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 VPS28Q9UK41 221 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 PCDHGA7Q9Y5G6 932 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 PTGDR2Q9Y5Y4 395 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 PLXNA4Q9HCM2 1894 aa10.65□□□□□ -0.7
CUX1-205ENST00000425244 MROH6A6NGR9 719 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 LRRC14BA6NHZ5 514 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 TRIM38O00635 465 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 PPP6CO00743 305 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 MUSKO15146 869 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 LDB2O43679 373 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 ABLIM3O94929 683 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 PGM3O95394 542 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 GLP2RO95838 553 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 ETS2P15036 469 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 STX5Q13190 355 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 KIF19Q2TAC6 998 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 LIN52Q52LA3 116 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 FBXO48Q5FWF7 155 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 MSANTD2Q6P1R3 559 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 PAOXQ6QHF9 649 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 CYP2R1Q6VVX0 501 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 RBM23Q86U06 439 aaKnown RBP10.65□□□□□ -0.71
CUX1-205ENST00000425244 ISCA2Q86U28 154 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 ARHGAP18Q8N392 663 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 PTGR2Q8N8N7 351 aaPredicted RBP10.65□□□□□ -0.71
CUX1-205ENST00000425244 ATP6V1E2Q96A05 226 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 RANBP9Q96S59 729 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 ZBP1Q9H171 429 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 MTIF3Q9H2K0 278 aaKnown RBP10.65□□□□□ -0.71
CUX1-205ENST00000425244 IL1RL2Q9HB29 575 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 RIMS3Q9UJD0 308 aa10.65□□□□□ -0.71
CUX1-205ENST00000425244 FNDC3AQ9Y2H6 1198 aaKnown RBP10.65□□□□□ -0.71
CUX1-205ENST00000425244 PATJQ8NI35 1801 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 DOCK6Q96HP0 2047 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 UBA6A0AVT1 1052 aaPredicted RBP10.64□□□□□ -0.71
CUX1-205ENST00000425244 CCDC162PA2VCL2 907 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 LINC01553A4QN01 128 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 C9JVG2 144 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 FBP2O00757 339 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 MRASO14807 208 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 CD3EAPO15446 510 aaKnown RBP10.64□□□□□ -0.71
CUX1-205ENST00000425244 DNAJA2O60884 412 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 PAPSS2O95340 614 aaPredicted RBP10.64□□□□□ -0.71
CUX1-205ENST00000425244 CRTAMO95727 393 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 IMPDH1P20839 514 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 BMPR1AP36894 532 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 GRIA2P42262 883 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 MAGEA10P43363 369 aaPredicted RBP10.64□□□□□ -0.71
CUX1-205ENST00000425244 GK3PQ14409 553 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 RFTN1Q14699 578 aaPredicted RBP10.64□□□□□ -0.71
CUX1-205ENST00000425244 MAPRE2Q15555 327 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 PFKFB4Q16877 469 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 PITRM1Q5JRX3 1037 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 C6orf52Q5T4I8 152 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 IL23RQ5VWK5 629 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 UGT2A3Q6UWM9 527 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 C2orf15Q8WU43 125 aaKnown RBP10.64□□□□□ -0.71
CUX1-205ENST00000425244 CLP1Q92989 425 aaKnown RBP10.64□□□□□ -0.71
CUX1-205ENST00000425244 BTBD9Q96Q07 612 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 SPON2Q9BUD6 331 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 POLR1EQ9GZS1 481 aaKnown RBP10.64□□□□□ -0.71
CUX1-205ENST00000425244 Q9H521 79 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.64□□□□□ -0.71
CUX1-205ENST00000425244 APPL1Q9UKG1 709 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 PCDHGB4Q9UN71 923 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 PCDHGB5Q9Y5G0 923 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 UBXN8O00124 270 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 ACOT8O14734 319 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 PER2O15055 1255 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 RNASEH2AO75792 299 aaKnown RBP10.64□□□□□ -0.71
CUX1-205ENST00000425244 SNRPB2P08579 225 aaKnown RBP10.64□□□□□ -0.71
CUX1-205ENST00000425244 CTSAP10619 480 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 IRF1P10914 325 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 IRS1P35568 1242 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 PBX2P40425 430 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 STX1BP61266 288 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 RAB33AQ14088 237 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 SEMA3AQ14563 771 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 VEPH1Q14D04 833 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 TRIP4Q15650 581 aaPredicted RBP10.64□□□□□ -0.71
CUX1-205ENST00000425244 CNPY1Q3B7I2 92 aa10.64□□□□□ -0.71
CUX1-205ENST00000425244 UNC50Q53HI1 259 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms