RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TSPAN33Q86UF1 283 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 SPEM1Q8N4L4 309 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 CAMKK1Q8N5S9 505 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 OR14C36Q8NHC7 312 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 ALKBH8Q96BT7 664 aaKnown RBP10.29□□□□□ -0.76
MDC1-205ENST00000425072 ULK4Q96C45 1275 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 EID2BQ96D98 161 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 MRGPRX1Q96LB2 322 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 SMIM14Q96QK8 99 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 AGAP2Q99490 1192 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 ZSCAN5AQ9BUG6 496 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 C1QTNF7Q9BXJ2 289 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 MKRN2Q9H000 416 aaKnown RBP10.29□□□□□ -0.76
MDC1-205ENST00000425072 CCDC68Q9H2F9 335 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 RHOJQ9H4E5 214 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 POLR3BQ9NW08 1133 aaPredicted RBP10.29□□□□□ -0.76
MDC1-205ENST00000425072 NFKBIL1Q9UBC1 381 aaPredicted RBP10.29□□□□□ -0.76
MDC1-205ENST00000425072 TBK1Q9UHD2 729 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 FKBPLQ9UIM3 349 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 NOVA2Q9UNW9 492 aaKnown RBP10.29□□□□□ -0.76
MDC1-205ENST00000425072 ACTL7BQ9Y614 415 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 COMMD10Q9Y6G5 202 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 XIRP2A4UGR9 3374 aa10.29□□□□□ -0.76
MDC1-205ENST00000425072 COL4A3Q01955 1670 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TRPM6Q9BX84 2022 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TBC1D3DA0A087WVF3 549 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TBC1D3IA0A087WXS9 549 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TBC1D3EA0A087X179 549 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TBC1D3KA0A087X1G2 549 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 A0A1W2PP55 124 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TBC1D3FA6NER0 549 aaPredicted RBP10.28□□□□□ -0.76
MDC1-205ENST00000425072 LRRC72A6NJI9 287 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TBC1D3LB9A6J9 549 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 MMP20O60882 483 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 ZNF217O75362 1048 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 FAM155BO75949 473 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TM7SF2O76062 418 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 HAUS5O94927 633 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 ITGA2BP08514 1039 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TBC1D3HP0C7X1 549 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 RALBP11234 206 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 ZNF7P17097 686 aaPredicted RBP10.28□□□□□ -0.76
MDC1-205ENST00000425072 LHCGRP22888 699 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 GCAP28676 217 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 DRD3P35462 400 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 CD151P48509 253 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 SLC12A2P55011 1212 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 DCDC1P59894 354 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 SEMG2Q02383 582 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 DPTQ07507 201 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 SIGLEC14Q08ET2 396 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 PEX6Q13608 980 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 AGERQ15109 404 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 SETMARQ53H47 684 aaPredicted RBP10.28□□□□□ -0.76
MDC1-205ENST00000425072 TNFAIP8L3Q5GJ75 292 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 MROH9Q5TGP6 573 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TBC1D3GQ6DHY5 549 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TBC1D3CQ6IPX1 549 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 KIAA1161Q6NSJ0 714 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 Q6ZVL8 140 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 HSD11B1LQ7Z5J1 315 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 CCDC91Q7Z6B0 441 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TBC1D3Q8IZP1 549 aaPredicted RBP10.28□□□□□ -0.76
MDC1-205ENST00000425072 AADATQ8N5Z0 425 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TRAM1L1Q8N609 369 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 ARFGAP2Q8N6H7 521 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 ACMSDQ8TDX5 336 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 ASB12Q8WXK4 309 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 EDAQ92838 391 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 FAM131CQ96AQ9 280 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 AP2M1Q96CW1 435 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TSPAN17Q96FV3 270 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 VPS39Q96JC1 886 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 CABS1Q96KC9 395 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 COQ10AQ96MF6 247 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 SMC6Q96SB8 1091 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 RBBP8Q99708 897 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 LRFN3Q9BTN0 628 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 BTBD1Q9H0C5 482 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 TBC1D17Q9HA65 648 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 SGK2Q9HBY8 427 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 CD248Q9HCU0 757 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 PREBQ9HCU5 417 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 MUTYHQ9UIF7 546 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 CRLS1Q9UJA2 301 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 VWA7Q9Y334 891 aa10.28□□□□□ -0.76
MDC1-205ENST00000425072 MTF2Q9Y483 593 aaPredicted RBP10.28□□□□□ -0.76
MDC1-205ENST00000425072 MUC22E2RYF6 1773 aaPredicted RBP10.28□□□□□ -0.76
MDC1-205ENST00000425072 TCRBV21S2A2A0A5A6 115 aa10.27□□□□□ -0.77
MDC1-205ENST00000425072 AGAP14A8MT82 685 aa10.27□□□□□ -0.77
MDC1-205ENST00000425072 TRIM49D1C9J1S8 452 aa10.27□□□□□ -0.77
MDC1-205ENST00000425072 H3BMM5 538 aa10.27□□□□□ -0.77
MDC1-205ENST00000425072 CCL22O00626 93 aa10.27□□□□□ -0.77
MDC1-205ENST00000425072 PLRG1O43660 514 aaKnown RBP10.27□□□□□ -0.77
MDC1-205ENST00000425072 RECQL5O94762 991 aaPredicted RBP10.27□□□□□ -0.77
MDC1-205ENST00000425072 PRAMEF1O95521 474 aa10.27□□□□□ -0.77
MDC1-205ENST00000425072 MPOP05164 745 aa10.27□□□□□ -0.77
MDC1-205ENST00000425072 C1SP09871 688 aa10.27□□□□□ -0.77
MDC1-205ENST00000425072 GABRG2P18507 467 aa10.27□□□□□ -0.77
MDC1-205ENST00000425072 CRABP2P29373 138 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms