RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 AAR2Q9Y312 384 aaKnown RBP10.9□□□□□ -0.66
USP49-204ENST00000423567 ZNF711Q9Y462 761 aa10.9□□□□□ -0.66
USP49-204ENST00000423567 COL5A1P20908 1838 aaPredicted RBP10.9□□□□□ -0.66
USP49-204ENST00000423567 ANKRD36A6QL64 1941 aa10.9□□□□□ -0.67
USP49-204ENST00000423567 TP53BP1Q12888 1972 aaPredicted RBP10.89□□□□□ -0.67
USP49-204ENST00000423567 CPED1A4D0V7 1026 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 FAM221BA6H8Z2 402 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 ASMTLO95671 621 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 GP1BAP07359 652 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 PIRTP0C851 137 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 GIMD1P0DJR0 217 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 JUPP14923 745 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 CCZ1BP86790 482 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 CCZ1P86791 482 aaPredicted RBP10.89□□□□□ -0.67
USP49-204ENST00000423567 ILF3Q12906 894 aaKnown RBP eCLIP10.89□□□□□ -0.67
USP49-204ENST00000423567 PEX6Q13608 980 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 TCEA2Q15560 299 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 SMAD1Q15797 465 aaKnown RBP10.89□□□□□ -0.67
USP49-204ENST00000423567 CDKN3Q16667 212 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 ANKRD20A2Q5SQ80 823 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 ANKRD20A1Q5TYW2 823 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 ANKRD20A3Q5VUR7 823 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 KDELC1Q6UW63 502 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 UNQ6494/PRO21346Q6UXR6 183 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 ARHGEF18Q6ZSZ5 1173 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 RFLNAQ6ZTI6 216 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 PELI3Q8N2H9 469 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 SLC25A41Q8N5S1 370 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 ARL10Q8N8L6 244 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 TRIM58Q8NG06 486 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 NAT6Q93015 286 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 SPATA13Q96N96 652 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 BOCQ9BWV1 1114 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 SPATA16Q9BXB7 569 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 GSDMCQ9BYG8 508 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 CLPBQ9H078 707 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 TRABDQ9H4I3 376 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 CAAP1Q9H8G2 361 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 C10orf88Q9H8K7 445 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 MRPL40Q9NQ50 206 aaKnown RBP10.89□□□□□ -0.67
USP49-204ENST00000423567 HACD3Q9P035 362 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 GULP1Q9UBP9 304 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 PPP2R2CQ9Y2T4 447 aa10.89□□□□□ -0.67
USP49-204ENST00000423567 LOC285095A0A1B0GVY8 99 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 INPP4BO15327 924 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 FGF1P05230 155 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 CEACAM5P06731 702 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 CELA2BP08218 269 aaPredicted RBP10.88□□□□□ -0.67
USP49-204ENST00000423567 ACTN2P35609 894 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 GNPDA1P46926 289 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 DCDC1P59894 354 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 SIRPB2Q5JXA9 342 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 ZNF569Q5MCW4 686 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 HES3Q5TGS1 186 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 MEI1Q5TIA1 1274 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 ZDHHC20Q5W0Z9 365 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 ALS2CLQ60I27 953 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 CCNI2Q6ZMN8 369 aaPredicted RBP10.88□□□□□ -0.67
USP49-204ENST00000423567 EFL1Q7Z2Z2 1120 aaKnown RBP10.88□□□□□ -0.67
USP49-204ENST00000423567 GALNT13Q8IUC8 556 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 FAM46DQ8NEK8 389 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 OR6C4Q8NGE1 309 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 CCDC110Q8TBZ0 833 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 IFI44Q8TCB0 444 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 MAPK15Q8TD08 544 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 BLOC1S5Q8TDH9 187 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 OXNAD1Q96HP4 312 aaPredicted RBP10.88□□□□□ -0.67
USP49-204ENST00000423567 MRGPRX2Q96LB1 330 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 AGAP2Q99490 1192 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 ZSCAN5AQ9BUG6 496 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 FRMD8Q9BZ67 464 aaPredicted RBP10.88□□□□□ -0.67
USP49-204ENST00000423567 FRMD8P1Q9BZ68 369 aaPredicted RBP10.88□□□□□ -0.67
USP49-204ENST00000423567 TMEM168Q9H0V1 697 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 CARD9Q9H257 536 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 TRNAU1APQ9NX07 287 aaKnown RBP10.88□□□□□ -0.67
USP49-204ENST00000423567 SIRPGQ9P1W8 387 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 PADI4Q9UM07 663 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 SUFUQ9UMX1 484 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 SLC17A4Q9Y2C5 497 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 GPSM3Q9Y4H4 160 aa10.88□□□□□ -0.67
USP49-204ENST00000423567 EME2A4GXA9 379 aaPredicted RBP10.87□□□□□ -0.67
USP49-204ENST00000423567 TMEM8BA6NDV4 472 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 C5orf60A6NFR6 353 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 SOD1P00441 154 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 IVLP07476 585 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 MYF5P13349 255 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 PSMB4P28070 264 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 HMGCLP35914 325 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 POLD2P49005 469 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 KLF1Q13351 362 aaPredicted RBP10.87□□□□□ -0.67
USP49-204ENST00000423567 BIRC2Q13490 618 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 SLC1A5Q15758 541 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 P3H1Q32P28 736 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 HENMT1Q5T8I9 393 aaKnown RBP10.87□□□□□ -0.67
USP49-204ENST00000423567 PDPK2PQ6A1A2 396 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 MARK2Q7KZI7 788 aaKnown RBP10.87□□□□□ -0.67
USP49-204ENST00000423567 GLT6D1Q7Z4J2 308 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 TMC3Q7Z5M5 1100 aa10.87□□□□□ -0.67
USP49-204ENST00000423567 TRIM74Q86UV6 250 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms