RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 RAET1GQ6H3X3 334 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 PNCKQ6P2M8 343 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 CASC4Q6P4E1 433 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 ADAMTSL4Q6UY14 1074 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 RABEPKQ7Z6M1 372 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 OR13J1Q8NGT2 312 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 FAM174AQ8TBP5 190 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 DTX3LQ8TDB6 740 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 AGAP2Q99490 1192 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 ZSCAN5AQ9BUG6 496 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 FAM129AQ9BZQ8 928 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 RRAGDQ9NQL2 400 aaPredicted RBP16.91■□□□□ 0.3
COL7A1-202ENST00000422991 GDF3Q9NR23 364 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 CHRAC1Q9NRG0 131 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 SAMD15Q9P1V8 674 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 NCDNQ9UBB6 729 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 SLC2A6Q9UGQ3 507 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 FNDC3AQ9Y2H6 1198 aaKnown RBP16.91■□□□□ 0.3
COL7A1-202ENST00000422991 PCDH15Q96QU1 1955 aa16.91■□□□□ 0.3
COL7A1-202ENST00000422991 GLYATL1P3A0A0U1RQE8 302 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 FAM237BA0A1B0GVD1 139 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 FADS2P1A8MWK0 482 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 PRR5-ARHGAP8B1AHC4 643 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 E7ESA3 106 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 H7C0S8 307 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 WNT1P04628 370 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 PYGLP06737 847 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 RETP07949 1114 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 TRIM23P36406 574 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 MPLP40238 635 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 GPR1P46091 355 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 ARSDP51689 593 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 PFN3P60673 137 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 TMPRSS15P98073 1019 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 XIAPP98170 497 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 PDPK2PQ6A1A2 396 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 LAYNQ6UX15 382 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 FAM151BQ6UXP7 276 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 PTAR1Q7Z6K3 402 aaPredicted RBP16.9■□□□□ 0.3
COL7A1-202ENST00000422991 IQCHQ86VS3 1027 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 TRAM1L1Q8N609 369 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 MFSD2AQ8NA29 543 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 OR13H1Q8NG92 308 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 LRRC39Q96DD0 335 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 STAMBPL1Q96FJ0 436 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 WDR83Q9BRX9 315 aaKnown RBP16.9■□□□□ 0.3
COL7A1-202ENST00000422991 SPATA16Q9BXB7 569 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 PHACTR1Q9C0D0 580 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 ARRDC1-AS1Q9H2J1 176 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 WDR26Q9H7D7 661 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 GPR27Q9NS67 375 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 TREX1Q9NSU2 369 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 APPL1Q9UKG1 709 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 MAD1L1Q9Y6D9 718 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 LRP4O75096 1905 aa16.9■□□□□ 0.3
COL7A1-202ENST00000422991 MAGEB16A2A368 324 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 TOR1BO14657 336 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 PRAMEF1O95521 474 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 NMBRP28336 390 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 ECHS1P30084 290 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 RABIFP47224 123 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 YPEL5P62699 121 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 OVGP1Q12889 678 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 PEX6Q13608 980 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 CUL1Q13616 776 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 TEAD4Q15561 434 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 CHRNA6Q15825 494 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 DUOXA1Q1HG43 343 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 CENPUQ71F23 418 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 HEATR4Q86WZ0 1026 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 IGDCC3Q8IVU1 814 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 IFT20Q8IY31 132 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 CEP76Q8TAP6 659 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 MFSD3Q96ES6 412 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 CDKN2AIPNLQ96HQ2 116 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 TBATAQ96M53 351 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 EBNA1BP2Q99848 306 aaKnown RBP16.89■□□□□ 0.29
COL7A1-202ENST00000422991 TRIM56Q9BRZ2 755 aaKnown RBP16.89■□□□□ 0.29
COL7A1-202ENST00000422991 APOOQ9BUR5 198 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 TEX101Q9BY14 249 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 FOXP3Q9BZS1 431 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 GMEB2Q9UKD1 530 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 OR1A2Q9Y585 309 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 TEX264Q9Y6I9 313 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 RALGAPA1Q6GYQ0 2036 aa16.89■□□□□ 0.29
COL7A1-202ENST00000422991 CCDC162PA2VCL2 907 aa16.88■□□□□ 0.29
COL7A1-202ENST00000422991 VILLO15195 856 aa16.88■□□□□ 0.29
COL7A1-202ENST00000422991 EIF3HO15372 352 aaKnown RBP eCLIP16.88■□□□□ 0.29
COL7A1-202ENST00000422991 GPR39O43194 453 aa16.88■□□□□ 0.29
COL7A1-202ENST00000422991 SRP72O76094 671 aaKnown RBP16.88■□□□□ 0.29
COL7A1-202ENST00000422991 HOXC4P09017 264 aaPredicted RBP16.88■□□□□ 0.29
COL7A1-202ENST00000422991 THEGLP0DJG4 465 aa16.88■□□□□ 0.29
COL7A1-202ENST00000422991 PGAM1P18669 254 aa16.88■□□□□ 0.29
COL7A1-202ENST00000422991 MC4RP32245 332 aa16.88■□□□□ 0.29
COL7A1-202ENST00000422991 ELK3P41970 407 aa16.88■□□□□ 0.29
COL7A1-202ENST00000422991 CARSP49589 748 aaKnown RBP16.88■□□□□ 0.29
COL7A1-202ENST00000422991 CSNK1EP49674 416 aaKnown RBP16.88■□□□□ 0.29
COL7A1-202ENST00000422991 KIAA1024LP59773 190 aa16.88■□□□□ 0.29
COL7A1-202ENST00000422991 TUBB4BP68371 445 aa16.88■□□□□ 0.29
COL7A1-202ENST00000422991 CDK3Q00526 305 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms