RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 LIN7AO14910 233 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-202ENST00000422785 TEX28O15482 410 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 GPC4O75487 556 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 PKMP14618 531 aaKnown RBP13.72□□□□□ -0.21
CDCA3-202ENST00000422785 CLCN4P51793 760 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 CDH13P55290 713 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 SH3BP2P78314 561 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 MAPRE2Q15555 327 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 PPP1R3AQ16821 1122 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 PIGGQ5H8A4 983 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 AARS2Q5JTZ9 985 aaKnown RBP13.72□□□□□ -0.21
CDCA3-202ENST00000422785 KBTBD6Q86V97 674 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 GPR65Q8IYL9 337 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 CRISPLD2Q9H0B8 497 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 WDR41Q9HAD4 459 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 BPIFA1Q9NP55 256 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.72□□□□□ -0.21
CDCA3-202ENST00000422785 UTP6Q9NYH9 597 aaKnown RBP13.72□□□□□ -0.21
CDCA3-202ENST00000422785 FCF1Q9Y324 198 aaKnown RBP13.72□□□□□ -0.21
CDCA3-202ENST00000422785 VPS26AO75436 327 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 CDK14O94921 469 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 SIX3O95343 332 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-202ENST00000422785 GFAPP14136 432 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 PTK2BQ14289 1009 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 LARP4Q71RC2 724 aaKnown RBP eCLIP13.72□□□□□ -0.213e-7■□□□□ 10.9
CDCA3-202ENST00000422785 DHDDSQ86SQ9 333 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 MFN1Q8IWA4 741 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 KBTBD2Q8IY47 623 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 WFDC5Q8TCV5 224 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 USP13Q92995 863 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-202ENST00000422785 RNF112Q9ULX5 631 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 ASB3Q9Y575 518 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 OBSL1O75147 1896 aa13.72□□□□□ -0.21
CDCA3-202ENST00000422785 PSMD12O00232 456 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-202ENST00000422785 LILRB3O75022 631 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 ADARP55265 1226 aaKnown RBP13.71□□□□□ -0.21
CDCA3-202ENST00000422785 AP1S1P61966 158 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 STX5Q13190 355 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 BLMHQ13867 455 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 ZNF423Q2M1K9 1284 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 ZRANB3Q5FWF4 1079 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 HMGCLL1Q8TB92 370 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 C19orf60Q96EN9 201 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 MRPL1Q9BYD6 325 aaKnown RBP13.71□□□□□ -0.21
CDCA3-202ENST00000422785 MAGEE1Q9HCI5 957 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 LSM7Q9UK45 103 aaKnown RBP13.71□□□□□ -0.21
CDCA3-202ENST00000422785 COMMD10Q9Y6G5 202 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 SYCE1LA8MT33 242 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 SUPT3HB4E1H0 165 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 OR1I1O60431 355 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 SUPT3HO75486 399 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 MT-CO1P00395 513 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 CLTBP09497 229 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 ENO3P13929 434 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-202ENST00000422785 ATP4BP51164 291 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 FASTKQ14296 549 aaKnown RBP13.71□□□□□ -0.21
CDCA3-202ENST00000422785 PTPRRQ15256 657 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 ATXN7L2Q5T6C5 722 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-202ENST00000422785 ANO7Q6IWH7 933 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 GK5Q6ZS86 529 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 FBXO39Q8N4B4 442 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 NPAS2Q99743 824 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 C2orf49Q9BVC5 232 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-202ENST00000422785 MID1IP1Q9NPA3 183 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 IL17CQ9P0M4 197 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 GALPQ9UBC7 116 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 IKZF3Q9UKT9 509 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 PKP3Q9Y446 797 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 ZNF711Q9Y462 761 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 DNAJC15Q9Y5T4 150 aa13.71□□□□□ -0.21
CDCA3-202ENST00000422785 LRRC14BA6NHZ5 514 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 AZIN1O14977 448 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 CLASP2O75122 1294 aaKnown RBP13.71□□□□□ -0.22
CDCA3-202ENST00000422785 ECI2O75521 394 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 SPATA31D3P0C874 917 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 ARSAP15289 507 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 HMGCLP35914 325 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 PTGER3P43115 390 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 THOP1P52888 689 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 HTRA3P83110 453 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 XIAPP98170 497 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 CREMQ03060 361 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 TSNQ15631 228 aaKnown RBP13.71□□□□□ -0.22
CDCA3-202ENST00000422785 CTSL3PQ5NE16 218 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 RETSATQ6NUM9 610 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 RNF111Q6ZNA4 994 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 SPATA31D4Q6ZUB0 917 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 HIPK4Q8NE63 616 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 KCNJ9Q92806 393 aa13.71□□□□□ -0.22
CDCA3-202ENST00000422785 FUBP1Q96AE4 644 aaKnown RBP13.71□□□□□ -0.22
CDCA3-202ENST00000422785 TRMT6Q9UJA5 497 aaKnown RBP13.71□□□□□ -0.22
CDCA3-202ENST00000422785 PPP6CO00743 305 aa13.7□□□□□ -0.22
CDCA3-202ENST00000422785 CFLARO15519 480 aa13.7□□□□□ -0.22
CDCA3-202ENST00000422785 PGLSO95336 258 aa13.7□□□□□ -0.22
CDCA3-202ENST00000422785 TSPAN12O95859 305 aa13.7□□□□□ -0.22
CDCA3-202ENST00000422785 GABRR2P28476 465 aa13.7□□□□□ -0.22
CDCA3-202ENST00000422785 PPM1AP35813 382 aa13.7□□□□□ -0.22
CDCA3-202ENST00000422785 NAA20P61599 178 aa13.7□□□□□ -0.22
CDCA3-202ENST00000422785 WDR5P61964 334 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms