RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 FAM46DQ8NEK8 389 aa21.81■■□□□ 1.08
TRAF4-204ENST00000422344 SPATA22Q8NHS9 363 aa21.81■■□□□ 1.08
TRAF4-204ENST00000422344 HTR3CQ8WXA8 447 aa21.81■■□□□ 1.08
TRAF4-204ENST00000422344 SLC39A7Q92504 469 aa21.81■■□□□ 1.08
TRAF4-204ENST00000422344 FRMD8Q9BZ67 464 aaPredicted RBP21.81■■□□□ 1.08
TRAF4-204ENST00000422344 NRSN2Q9GZP1 204 aa21.81■■□□□ 1.08
TRAF4-204ENST00000422344 PRORYQ9H606 182 aa21.81■■□□□ 1.08
TRAF4-204ENST00000422344 AMFRQ9UKV5 643 aa21.81■■□□□ 1.08
TRAF4-204ENST00000422344 RRP8O43159 456 aaKnown RBP21.8■■□□□ 1.08
TRAF4-204ENST00000422344 MT-CYBP00156 380 aaPredicted RBP21.8■■□□□ 1.08
TRAF4-204ENST00000422344 CEACAM5P06731 702 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 NFKB1P19838 968 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 GSDMDP57764 484 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 C19orf57Q0VDD7 668 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 WASHC5Q12768 1159 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 ILF3Q12906 894 aaKnown RBP eCLIP21.8■■□□□ 1.08
TRAF4-204ENST00000422344 XRCC4Q13426 336 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 RTP5Q14D33 572 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 PID1Q7Z2X4 250 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 LRRC57Q8N9N7 239 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 HIC2Q96JB3 615 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 TRIB3Q96RU7 358 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 GSDMCQ9BYG8 508 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 OSBPL8Q9BZF1 889 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 FAM83DQ9H4H8 585 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 SYNDIG1Q9H7V2 258 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 ZFYVE1Q9HBF4 777 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 UBP1Q9NZI7 540 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 SUFUQ9UMX1 484 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 EFR3BQ9Y2G0 817 aa21.8■■□□□ 1.08
TRAF4-204ENST00000422344 RGSL1A5PLK6 1076 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 INPP4BO15327 924 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 NDST3O95803 873 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 SOD1P00441 154 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 SLC4A1P02730 911 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 SPINT3P49223 89 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 PERM1Q5SV97 790 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 CDCP2Q5VXM1 449 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 LYSMD3Q7Z3D4 306 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 UBL4BQ8N7F7 174 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 OR6C4Q8NGE1 309 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 WDR48Q8TAF3 677 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 TADA1Q96BN2 335 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 SRPK1Q96SB4 655 aaKnown RBP21.79■■□□□ 1.08
TRAF4-204ENST00000422344 AGAP2Q99490 1192 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 CCDC3Q9BQI4 270 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 GPR63Q9BZJ6 419 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 DPEP2Q9H4A9 486 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 MAGEE1Q9HCI5 957 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 TRIM10Q9UDY6 481 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 FAM153AQ9UHL3 310 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 TRHDEQ9UKU6 1024 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 SLC17A4Q9Y2C5 497 aa21.79■■□□□ 1.08
TRAF4-204ENST00000422344 B4DGG1 531 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 CSO75390 466 aaKnown RBP21.78■■□□□ 1.08
TRAF4-204ENST00000422344 TJP3O95049 919 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 ASMTLO95671 621 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 IVLP07476 585 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 PIRTP0C851 137 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 PTPN7P35236 360 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 POLD2P49005 469 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 NOMO1Q15155 1222 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 TRIM74Q86UV6 250 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 CDKL3Q8IVW4 592 aaPredicted RBP21.78■■□□□ 1.08
TRAF4-204ENST00000422344 ZNF567Q8N184 647 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 CCL4L1Q8NHW4 92 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 CDH19Q9H159 772 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 RAD18Q9NS91 495 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 TRNAU1APQ9NX07 287 aaKnown RBP21.78■■□□□ 1.08
TRAF4-204ENST00000422344 RSPH14Q9UHP6 348 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 SHOC2Q9UQ13 582 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 TMEM98Q9Y2Y6 226 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 ZNF711Q9Y462 761 aa21.78■■□□□ 1.08
TRAF4-204ENST00000422344 MIF4GDA9UHW6 222 aaKnown RBP21.77■■□□□ 1.08
TRAF4-204ENST00000422344 F5H423 210 aaPredicted RBP21.77■■□□□ 1.08
TRAF4-204ENST00000422344 ATXN7O15265 892 aaPredicted RBP21.77■■□□□ 1.08
TRAF4-204ENST00000422344 STK10O94804 968 aaKnown RBP21.77■■□□□ 1.08
TRAF4-204ENST00000422344 CD68P34810 354 aaPredicted RBP21.77■■□□□ 1.08
TRAF4-204ENST00000422344 OTUD4Q01804 1114 aaKnown RBP21.77■■□□□ 1.08
TRAF4-204ENST00000422344 PEX6Q13608 980 aa21.77■■□□□ 1.08
TRAF4-204ENST00000422344 RBM44Q6ZP01 1051 aaKnown RBP21.77■■□□□ 1.08
TRAF4-204ENST00000422344 MARK2Q7KZI7 788 aaKnown RBP21.77■■□□□ 1.08
TRAF4-204ENST00000422344 ACTL9Q8TC94 416 aa21.77■■□□□ 1.08
TRAF4-204ENST00000422344 GPBAR1Q8TDU6 330 aa21.77■■□□□ 1.08
TRAF4-204ENST00000422344 ALG3Q92685 438 aa21.77■■□□□ 1.08
TRAF4-204ENST00000422344 CCDC74AQ96AQ1 378 aa21.77■■□□□ 1.08
TRAF4-204ENST00000422344 FCRL3Q96P31 734 aaPredicted RBP21.77■■□□□ 1.08
TRAF4-204ENST00000422344 FCRL5Q96RD9 977 aa21.77■■□□□ 1.08
TRAF4-204ENST00000422344 CFAP46Q8IYW2 2715 aa21.77■■□□□ 1.07
TRAF4-204ENST00000422344 MGAQ8IWI9 3026 aa21.76■■□□□ 1.07
TRAF4-204ENST00000422344 TK2O00142 265 aa21.76■■□□□ 1.07
TRAF4-204ENST00000422344 BRINP1O60477 761 aa21.76■■□□□ 1.07
TRAF4-204ENST00000422344 C1QL1O75973 258 aa21.76■■□□□ 1.07
TRAF4-204ENST00000422344 RBL1P28749 1068 aa21.76■■□□□ 1.07
TRAF4-204ENST00000422344 WNT3AP56704 352 aa21.76■■□□□ 1.07
TRAF4-204ENST00000422344 EIF3EP60228 445 aaKnown RBP21.76■■□□□ 1.07
TRAF4-204ENST00000422344 HENMT1Q5T8I9 393 aaKnown RBP21.76■■□□□ 1.07
TRAF4-204ENST00000422344 ALS2CLQ60I27 953 aa21.76■■□□□ 1.07
TRAF4-204ENST00000422344 ITPRIPL1Q6GPH6 555 aa21.76■■□□□ 1.07
TRAF4-204ENST00000422344 GALNT13Q8IUC8 556 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms