RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 COL9A2Q14055 689 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-206ENST00000420121 PYCR3Q53H96 274 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 HENMT1Q5T8I9 393 aaKnown RBP10.98□□□□□ -0.65
SSBP3-206ENST00000420121 DOK6Q6PKX4 331 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 B4GALNT4Q76KP1 1039 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 CNGA4Q8IV77 575 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 SLITRK4Q8IW52 837 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 NRSN1Q8IZ57 195 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 ARL14Q8N4G2 192 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 Q8N9G6 341 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-206ENST00000420121 ZDHHC1Q8WTX9 485 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 IMP4Q96G21 291 aaKnown RBP10.98□□□□□ -0.65
SSBP3-206ENST00000420121 FCRL3Q96P31 734 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-206ENST00000420121 GSDMCQ9BYG8 508 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 BRD8Q9H0E9 1235 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 GOLPH3Q9H4A6 298 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 SUDS3Q9H7L9 328 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-206ENST00000420121 THSD1Q9NS62 852 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 GOLGA6AQ9NYA3 693 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 TFR2Q9UP52 801 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 OAS3Q9Y6K5 1087 aaKnown RBP10.98□□□□□ -0.65
SSBP3-206ENST00000420121 SDK2Q58EX2 2172 aa10.98□□□□□ -0.65
SSBP3-206ENST00000420121 ZNF106Q9H2Y7 1883 aaKnown RBP10.98□□□□□ -0.65
SSBP3-206ENST00000420121 PLD2O14939 933 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 PPM1DO15297 605 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 INPP4BO15327 924 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 DNAJC6O75061 913 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 TNFSF15O95150 251 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 LCA5LO95447 670 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 ECEL1O95672 775 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 EML2O95834 649 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 ITGA2BP08514 1039 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 HGFP14210 728 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 PECAM1P16284 738 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-206ENST00000420121 UGT1A5P35504 534 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 MLLT3P42568 568 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-206ENST00000420121 CDKN2BP42772 138 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 SLC1A1P43005 524 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 SPINT3P49223 89 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 INHBCP55103 352 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 ILF3Q12906 894 aaKnown RBP eCLIP10.97□□□□□ -0.65
SSBP3-206ENST00000420121 GALNT3Q14435 633 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 PRKD1Q15139 912 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-206ENST00000420121 ZFYVE27Q5T4F4 411 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 FOXR1Q6PIV2 292 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 SLC30A9Q6PML9 568 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 ZNF574Q6ZN55 896 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-206ENST00000420121 RAB11FIP2Q7L804 512 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 LYSMD3Q7Z3D4 306 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 RHOT1Q8IXI2 618 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 NDUFAF2Q8N183 169 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 KIAA1524Q8TCG1 905 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 KCNE4Q8WWG9 221 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 OR2M4Q96R27 311 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 MLPHQ9BV36 600 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-206ENST00000420121 CPNE5Q9HCH3 593 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 EPB41L5Q9HCM4 733 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 SAE1Q9UBE0 346 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-206ENST00000420121 DNPEPQ9ULA0 475 aa10.97□□□□□ -0.65
SSBP3-206ENST00000420121 C1orf232A0A0U1RR37 186 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 KLK10O43240 276 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 MT-CYBP00156 380 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-206ENST00000420121 ATP1A1P05023 1023 aaKnown RBP10.96□□□□□ -0.65
SSBP3-206ENST00000420121 TPM1P09493 284 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 KRT10P13645 584 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 CA4P22748 312 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 PTPN3P26045 913 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 RBMS1P29558 406 aaKnown RBP10.96□□□□□ -0.65
SSBP3-206ENST00000420121 CD68P34810 354 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-206ENST00000420121 ETV5P41161 510 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 ACTR1BP42025 376 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 MARCKSL1P49006 195 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 OR1D5P58170 312 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 ACTR1AP61163 376 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 DYNLT1P63172 113 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 CXADRP78310 365 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 CFHR1Q03591 330 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 AP1B1Q10567 949 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 WASHC5Q12768 1159 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 EIF3IQ13347 325 aaKnown RBP10.96□□□□□ -0.65
SSBP3-206ENST00000420121 PDK1Q15118 436 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 SLC14A2Q15849 920 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 GPR155Q7Z3F1 870 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 RFX6Q8HWS3 928 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 FBXO39Q8N4B4 442 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 EXD1Q8NHP7 514 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 SPATA22Q8NHS9 363 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-206ENST00000420121 SNRNP27Q8WVK2 155 aaKnown RBP10.96□□□□□ -0.65
SSBP3-206ENST00000420121 ZNF830Q96NB3 372 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-206ENST00000420121 TMEM74Q96NL1 305 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 AGAP3Q96P47 875 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 UBL7Q96S82 380 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-206ENST00000420121 DPH1Q9BZG8 443 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 CDH19Q9H159 772 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 SLC25A51Q9H1U9 297 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 SEMA6CQ9H3T2 930 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 RDH14Q9HBH5 336 aa10.96□□□□□ -0.65
SSBP3-206ENST00000420121 DDX56Q9NY93 547 aaKnown RBP10.96□□□□□ -0.65
SSBP3-206ENST00000420121 ACSL6Q9UKU0 697 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms