RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CRY1Q16526 586 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 AGBL4Q5VU57 503 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 KIAA1211LQ6NV74 962 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 AADATQ8N5Z0 425 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 ARFGAP2Q8N6H7 521 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 PAF1Q8N7H5 531 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 ASB12Q8WXK4 309 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 CLDN23Q96B33 292 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 CABS1Q96KC9 395 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 TTC1Q99614 292 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 MKRN2Q9H000 416 aaKnown RBP14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 LTB4R2Q9NPC1 389 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 FKBPLQ9UIM3 349 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 CACNA1HO95180 2353 aa14.2□□□□□ -0.14
SHMT1P1-201ENST00000419974 GLYATL1P3A0A0U1RQE8 302 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 KRBA1A5PL33 1030 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 UGT1A9O60656 530 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 RFPL1O75677 317 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 MT-ND3P03897 115 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 KRT15P19012 456 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 ITGALP20701 1170 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 TEAD1P28347 426 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 SLC26A3P40879 764 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 CCNFP41002 786 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 PTGER3P43115 390 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 RPS9P46781 194 aaKnown RBP14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 DGKEP52429 567 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 MAGOHP61326 146 aaKnown RBP14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 POU4F1Q01851 419 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 CNTN1Q12860 1018 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 CTBP1Q13363 440 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 ITIH4Q14624 930 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 PTPRCAPQ14761 206 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 PTPRRQ15256 657 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 TMED2Q15363 201 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 ZKSCAN8Q15776 578 aaPredicted RBP14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 MAP7D1Q3KQU3 841 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 HENMT1Q5T8I9 393 aaKnown RBP14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 PTAR1Q7Z6K3 402 aaPredicted RBP14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 TMPRSS6Q8IU80 811 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 DENND6AQ8IWF6 608 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 GPR26Q8NDV2 337 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 RPLP0P6Q8NHW5 317 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 ULK4Q96C45 1275 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 VPS39Q96JC1 886 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 VPS35Q96QK1 796 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 ZSCAN5AQ9BUG6 496 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 SUDS3Q9H7L9 328 aaPredicted RBP14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 CNOT10Q9H9A5 744 aaKnown RBP14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 UGT1A7Q9HAW7 530 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 UGT1A10Q9HAW8 530 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 UGT1A8Q9HAW9 530 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 POPDC3Q9HBV1 291 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 IL1RAPL1Q9NZN1 696 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 TBK1Q9UHD2 729 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 FBXL21Q9UKT6 434 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 SMG5Q9UPR3 1016 aaKnown RBP14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 SLC30A1Q9Y6M5 507 aa14.19□□□□□ -0.14
SHMT1P1-201ENST00000419974 IGLV3-16A0A075B6K0 115 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 SMIM23A6NLE4 172 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 A6NNZ2 444 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 TRIM49D1C9J1S8 452 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 GOLGA8TH3BQL2 631 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 WNT9AO14904 365 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 MID1O15344 667 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 GALR2O43603 387 aaPredicted RBP14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 PLRG1O43660 514 aaKnown RBP14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 BUD23O43709 281 aaKnown RBP14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 TYROBPO43914 113 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 PIAS1O75925 651 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 PRAMEF1O95521 474 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 ALDOAP04075 364 aaKnown RBP14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 PYGLP06737 847 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 ELFN1P0C7U0 828 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 COL6A2P12110 1019 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 GM2AP17900 193 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 AOC1P19801 751 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 RPS3P23396 243 aaKnown RBP eCLIP14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 OAS2P29728 719 aaKnown RBP14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 PSMD8P48556 350 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 METAP1P53582 386 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 TAS2R38P59533 333 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 INSCQ1MX18 579 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 TUBB8Q3ZCM7 444 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 TTC31Q49AM3 519 aaPredicted RBP14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 KDM7AQ6ZMT4 941 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 HSD11B1LQ7Z5J1 315 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 TRAM1L1Q8N609 369 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 TMEM105Q8N8V8 129 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 ZNF398Q8TD17 642 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 HEXDCQ8WVB3 486 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 LPGAT1Q92604 370 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 DTD2Q96FN9 168 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 MRGPRX1Q96LB2 322 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 SMC6Q96SB8 1091 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 FAM126AQ9BYI3 521 aaPredicted RBP14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 FAM83DQ9H4H8 585 aa14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 MARCH4Q9P2E8 410 aaPredicted RBP14.18□□□□□ -0.14
SHMT1P1-201ENST00000419974 PCDHB1Q9Y5F3 818 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms