RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 SMC2O95347 1197 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 DDX58O95786 925 aaKnown RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 LCATP04180 440 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 HEXAP06865 529 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 IRF1P10914 325 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 SRD5A1P18405 259 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 CD53P19397 219 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 EDN2P20800 178 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 GNLYP22749 145 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 MCM3P25205 808 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 CASQ1P31415 396 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 ABCD1P33897 745 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 RYKP34925 604 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 THPOP40225 353 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 CTCFP49711 727 aaPredicted RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 PGGT1BP53609 377 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 PMS2P54278 862 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 HNRNPH2P55795 449 aaKnown RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 HDAC4P56524 1084 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 MPP1Q00013 466 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 FAM27E3Q08E93 113 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 NEXNQ0ZGT2 675 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 ST3GAL1Q11201 340 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 TRAF1Q13077 416 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 HSPB2Q16082 182 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 ZSCAN26Q16670 478 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 HIST2H2ACQ16777 129 aaPredicted RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 DCAF6Q58WW2 860 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 FSCBQ5H9T9 825 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 PRAMEF19Q5SWL8 479 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 FNBP1LQ5T0N5 605 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 BEND3Q5T5X7 828 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 ADALQ6DHV7 355 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 ZNF549Q6P9A3 640 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 INO80CQ6PI98 192 aaPredicted RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 CPLX2Q6PUV4 134 aaKnown RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 SYT10Q6XYQ8 523 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 LEKR1Q6ZMV7 388 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 C11orf57Q6ZUT1 292 aaPredicted RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 TRILQ7L0X0 811 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 R3HCC1LQ7Z5L2 792 aaKnown RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 DHX40Q8IX18 779 aaKnown RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 MB21D2Q8IYB1 491 aaPredicted RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 CEP112Q8N8E3 955 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 MIGA1Q8NAN2 632 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 GJC3Q8NFK1 279 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 ASB5Q8WWX0 329 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 RFFLQ8WZ73 363 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 ZNF274Q96GC6 653 aaPredicted RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 CCDC34Q96HJ3 373 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 NEK1Q96PY6 1258 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 BBS4Q96RK4 519 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 SDF4Q9BRK5 362 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 FSD1Q9BTV5 496 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 UTP14AQ9BVJ6 771 aaKnown RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 HEMGNQ9BXL5 484 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 NUF2Q9BZD4 464 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 MRPL44Q9H9J2 332 aaKnown RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 ZNF446Q9NWS9 450 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 TAS2R10Q9NYW0 307 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 IL36RNQ9UBH0 155 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 DBF4Q9UBU7 674 aaPredicted RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 NDRG3Q9UGV2 375 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 HOOK1Q9UJC3 728 aaKnown RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 NAALADL1Q9UQQ1 740 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 CARD8Q9Y2G2 431 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 PTGDR2Q9Y5Y4 395 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 SIPA1L3O60292 1781 aaPredicted RBP2.74□□□□□ -1.97
VPS41-206ENST00000418457 LTN1O94822 1766 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 METP08581 1390 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 PALLDQ8WX93 1383 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 PLEKHG2Q9H7P9 1386 aa2.74□□□□□ -1.97
VPS41-206ENST00000418457 MARF1Q9Y4F3 1742 aaKnown RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 ACEP12821 1306 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 WDR19Q8NEZ3 1342 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 SH3TC1Q8TE82 1336 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 SALL1Q9NSC2 1324 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 KIF1AQ12756 1690 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 ADAMTS7Q9UKP4 1686 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 CAMTA1Q9Y6Y1 1673 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 EVPLQ92817 2033 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 A0A1B0GUL7 405 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 A0A1B0GVT2 93 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 ERICH4A6NGS2 130 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 USP27XA6NNY8 438 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 KDM4EB2RXH2 506 aaPredicted RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 INAFM1C9JVW0 142 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 KLRF2D3W0D1 207 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 LDLRAD4O15165 306 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 ASAP2O43150 1006 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 TNFSF14O43557 240 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 ITM2AO43736 263 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 SH3BP5O60239 455 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 STX10O60499 249 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 WDHD1O75717 1129 aaPredicted RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 MTA2O94776 668 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 RGS11O94810 467 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 RTN3O95197 1032 aaPredicted RBP2.73□□□□□ -1.97
VPS41-206ENST00000418457 MBD4O95243 580 aa2.73□□□□□ -1.97
VPS41-206ENST00000418457 CBSLP0DN79 551 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms