RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 CARSP49589 748 aaKnown RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 CRYBB1P53674 252 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 MRPS6P82932 125 aaKnown RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 GCNT1Q02742 428 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 FHL1Q13642 323 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 TMEM132DQ14C87 1099 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 POLD3Q15054 466 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 SLC18A3Q16572 532 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZNF699Q32M78 642 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZNF667Q5HYK9 610 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 C1orf220Q5T0J3 134 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 MARCH8Q5T0T0 291 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 C10orf76Q5T2E6 689 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 TMTC4Q5T4D3 741 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 TAF3Q5VWG9 929 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 NXNQ6DKJ4 435 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 TWF2Q6IBS0 349 aaKnown RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 SLC27A1Q6PCB7 646 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 CRELD2Q6UXH1 353 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 RANBP10Q6VN20 620 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 SCARA5Q6ZMJ2 495 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 H2AFVQ71UI9 128 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 TECPR1Q7Z6L1 1165 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 MRPL10Q7Z7H8 261 aaKnown RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 CD302Q8IX05 232 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 NME8Q8N427 588 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 NRACQ8N912 160 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 C9orf106Q8NAJ2 232 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRIM58Q8NG06 486 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 U2AF1L4Q8WU68 220 aaKnown RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 IPCEF1Q8WWN9 437 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 CTNNBL1Q8WYA6 563 aaPredicted RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 KAT2BQ92831 832 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 SEMA4DQ92854 862 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 CTHRC1Q96CG8 243 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 APIPQ96GX9 242 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 VPS50Q96JG6 964 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZNF560Q96MR9 790 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 GLT1D1Q96MS3 346 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 PI4K2AQ9BTU6 479 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 APOL6Q9BWW8 343 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 CHST8Q9H2A9 424 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 MINDY3Q9H8M7 445 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 TBC1D23Q9NUY8 699 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 SAGE1Q9NXZ1 904 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRIM10Q9UDY6 481 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 CPSF3Q9UKF6 684 aaKnown RBP3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 RIMKLBQ9ULI2 386 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 COQ4Q9Y3A0 265 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRIM17Q9Y577 477 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 TSC2P49815 1807 aa3.97□□□□□ -1.77
HMGB3P20-201ENST00000417997 PTPRJQ12913 1337 aa3.96□□□□□ -1.77
HMGB3P20-201ENST00000417997 A0A087X0T9 212 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 A0A0U1RQJ8 604 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 ANO9A1A5B4 782 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 GOLGA6CA6NDK9 693 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 GOLGA6BA6NDN3 693 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 TMCO5BA8MYB1 307 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 KBTBD13C9JR72 458 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 PROB1E7EW31 1015 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 THAP12O43422 761 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 BUB1O43683 1085 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 FAM189A1O60320 539 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 CSDE1O75534 798 aaKnown RBP3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 RPS6KA5O75582 802 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 INMTO95050 263 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 SLU7O95391 586 aaKnown RBP3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 MOCS3O95396 460 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 FAM228BP0C875 321 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 GOLGA6DP0CG33 693 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 MYF5P13349 255 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 ATF7P17544 494 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 CD58P19256 250 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 ABCB4P21439 1286 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 CST5P28325 142 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 PEX2P28328 305 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 HOXD9P28356 352 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 THPOP40225 353 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 TERF1P54274 439 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 TNNC1P63316 161 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 POU5F1Q01860 360 aaKnown RBP3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 CKAP4Q07065 602 aaKnown RBP3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 CUL2Q13617 745 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 GRM3Q14832 879 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 MFSD13AQ14CX5 517 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 RBMS2Q15434 407 aaKnown RBP3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 NAB2Q15742 525 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 PTGISQ16647 500 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 SGSM1Q2NKQ1 1148 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 CCDC181Q5TID7 509 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 AWAT2Q6E213 333 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 JADE1Q6IE81 842 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 SPOPLQ6IQ16 392 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 PPP1R2P3Q6NXS1 205 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 ALKBH5Q6P6C2 394 aaKnown RBP3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 C15orf39Q6ZRI6 1047 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 TRAPPC11Q7Z392 1133 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 ZNF571Q7Z3V5 609 aaPredicted RBP3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 IRF2BP2Q7Z5L9 587 aa3.96□□□□□ -1.78
HMGB3P20-201ENST00000417997 SESTD1Q86VW0 696 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms