RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 C19orf57Q0VDD7 668 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 BIRC2Q13490 618 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 TCEAL1Q15170 157 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 ARHGAP40Q5TG30 622 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 SLC30A9Q6PML9 568 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 RFLNAQ6ZTI6 216 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 CMKLR1Q99788 373 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 RIOK2Q9BVS4 552 aaKnown RBP25.2■■□□□ 1.62
VEGFA-208ENST00000417285 ADGRE3Q9BY15 652 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 DDX56Q9NY93 547 aaKnown RBP25.2■■□□□ 1.62
VEGFA-208ENST00000417285 AKAP7Q9P0M2 348 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-208ENST00000417285 ACSL6Q9UKU0 697 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 ATXN7L1Q9ULK2 861 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-208ENST00000417285 TMEM98Q9Y2Y6 226 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 HEY1Q9Y5J3 304 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 APOL1O14791 398 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 CLDN7O95471 211 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 ECEL1O95672 775 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 CPNE6O95741 557 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 KRT1P04264 644 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 AK4P27144 223 aaPredicted RBP25.19■■□□□ 1.62
VEGFA-208ENST00000417285 IFI35P80217 286 aaPredicted RBP25.19■■□□□ 1.62
VEGFA-208ENST00000417285 LRP8Q14114 963 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 NR1D2Q14995 579 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 SLC9A4Q6AI14 798 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 DOK6Q6PKX4 331 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 RHOT1Q8IXI2 618 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 PLD5Q8N7P1 536 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 LPCAT1Q8NF37 534 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 CCHCR1Q8TD31 782 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 LRRN4Q8WUT4 740 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 SMIM14Q96QK8 99 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 OR2M4Q96R27 311 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 MLPHQ9BV36 600 aaPredicted RBP25.19■■□□□ 1.62
VEGFA-208ENST00000417285 LOXL2Q9Y4K0 774 aa25.19■■□□□ 1.62
VEGFA-208ENST00000417285 HELZ2Q9BYK8 2649 aaKnown RBP25.19■■□□□ 1.62
VEGFA-208ENST00000417285 KIF26BQ2KJY2 2108 aa25.18■■□□□ 1.62
VEGFA-208ENST00000417285 ATMQ13315 3056 aa25.18■■□□□ 1.62
VEGFA-208ENST00000417285 C3orf70A6NLC5 250 aaPredicted RBP25.18■■□□□ 1.62
VEGFA-208ENST00000417285 ANKRD66B4E2M5 251 aa25.18■■□□□ 1.62
VEGFA-208ENST00000417285 ALDH4A1P30038 563 aa25.18■■□□□ 1.62
VEGFA-208ENST00000417285 MAZP56270 477 aaKnown RBP25.18■■□□□ 1.62
VEGFA-208ENST00000417285 PDK1Q15118 436 aa25.18■■□□□ 1.62
VEGFA-208ENST00000417285 PYCR3Q53H96 274 aa25.18■■□□□ 1.62
VEGFA-208ENST00000417285 JAMLQ86YT9 394 aa25.18■■□□□ 1.62
VEGFA-208ENST00000417285 SLITRK4Q8IW52 837 aa25.18■■□□□ 1.62
VEGFA-208ENST00000417285 PTCD2Q8WV60 388 aaKnown RBP25.18■■□□□ 1.62
VEGFA-208ENST00000417285 COX14Q96I36 57 aa25.18■■□□□ 1.62
VEGFA-208ENST00000417285 BRD8Q9H0E9 1235 aa25.18■■□□□ 1.62
VEGFA-208ENST00000417285 KCNK1O00180 336 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 SPOPO43791 374 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 ACTR1BP42025 376 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 CD86P42081 329 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 MAGEA1P43355 309 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 OR1D5P58170 312 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 ACTR1AP61163 376 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 CLN3Q13286 438 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 SQSTM1Q13501 440 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 CCDC81Q6ZN84 652 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 RFX6Q8HWS3 928 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 GALNT13Q8IUC8 556 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 NAGSQ8N159 534 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 TC2NQ8N9U0 490 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 AGAP2Q99490 1192 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 B3GNT4Q9C0J1 378 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 FAM83DQ9H4H8 585 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 VPS18Q9P253 973 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 PISDQ9UG56 409 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 ST14Q9Y5Y6 855 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 AHCTF1Q8WYP5 2266 aa25.17■■□□□ 1.62
VEGFA-208ENST00000417285 ARHGEF17Q96PE2 2063 aaPredicted RBP25.17■■□□□ 1.62
VEGFA-208ENST00000417285 C1orf232A0A0U1RR37 186 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 K7ENP7 123 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 PPP1R12AO14974 1030 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-208ENST00000417285 MMP2P08253 660 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 TNNT1P13805 278 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 HGFP14210 728 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 NOP2P46087 812 aaKnown RBP25.16■■□□□ 1.62
VEGFA-208ENST00000417285 SPINT3P49223 89 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 AP1B1Q10567 949 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 QPCTQ16769 361 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 AMZ1Q400G9 498 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 MAP9Q49MG5 647 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 PHF19Q5T6S3 580 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 INO80CQ6PI98 192 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-208ENST00000417285 CNTD1Q8N815 330 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 RNF25Q96BH1 459 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-208ENST00000417285 CCNL2Q96S94 520 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-208ENST00000417285 DPYSL5Q9BPU6 564 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 RMI1Q9H9A7 625 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 PKD2L2Q9NZM6 624 aa25.16■■□□□ 1.62
VEGFA-208ENST00000417285 ASMTLO95671 621 aa25.15■■□□□ 1.62
VEGFA-208ENST00000417285 COMTP21964 271 aa25.15■■□□□ 1.62
VEGFA-208ENST00000417285 CD1CP29017 333 aa25.15■■□□□ 1.62
VEGFA-208ENST00000417285 TAF1BQ53T94 588 aaPredicted RBP25.15■■□□□ 1.62
VEGFA-208ENST00000417285 USP53Q70EK8 1073 aa25.15■■□□□ 1.62
VEGFA-208ENST00000417285 SEMA6CQ9H3T2 930 aa25.15■■□□□ 1.62
VEGFA-208ENST00000417285 ZNHIT2Q9UHR6 403 aa25.15■■□□□ 1.62
VEGFA-208ENST00000417285 HYOU1Q9Y4L1 999 aa25.15■■□□□ 1.62
VEGFA-208ENST00000417285 HGSO14964 777 aaPredicted RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms