RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 SBK2P0C263 348 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 IRF1P10914 325 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 SNRPBP14678 240 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 IL2RBP14784 551 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ANPEPP15144 967 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 GJA1P17302 382 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CKMT2P17540 419 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ATP5JP18859 108 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CYP2B6P20813 491 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CYP2F1P24903 491 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 KLRC2P26717 231 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CD27P26842 260 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 FMO4P31512 558 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CHRNA7P36544 502 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 VIPR2P41587 438 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ALDH3B1P43353 468 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ASPAP45381 313 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CRKLP46109 303 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CEBPDP49716 269 aaPredicted RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PLCD1P51178 756 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ADCY7P51828 1080 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 RTP1P59025 263 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 DSTNP60981 165 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 RPL23AP62750 156 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 GSTO1P78417 241 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 B4GALNT1Q00973 533 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 GCNT1Q02742 428 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 TEKQ02763 1124 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 TAP1Q03518 808 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CEBPZQ03701 1054 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 RBPJQ06330 500 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PPIDQ08752 370 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PPP1R8Q12972 351 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 MAB21L1Q13394 359 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 DRP2Q13474 957 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PDIA5Q14554 519 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM187BQ17R55 369 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 MTHFSDQ2M296 383 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 BCL7AQ4VC05 210 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PLEKHO1Q53GL0 409 aaPredicted RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 TMEM41BQ5BJD5 291 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PPP6R3Q5H9R7 873 aaPredicted RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 EMC4Q5J8M3 183 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CEP78Q5JTW2 689 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 RARS2Q5T160 578 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 AKNAD1Q5T1N1 836 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PHF19Q5T6S3 580 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 C6orf163Q5TEZ5 329 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 MANEALQ5VSG8 457 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 TCERG1LQ5VWI1 586 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 HLA-DQA1Q5Y7H0 255 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ATG9BQ674R7 924 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 WBP2NLQ6ICG8 309 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 SULT1C3Q6IMI6 304 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 TPGS1Q6ZTW0 290 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 Q6ZVL8 140 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 BZW1Q7L1Q6 419 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PRSS42Q7Z5A4 293 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CENPVQ7Z7K6 275 aaPredicted RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ZC3H18Q86VM9 953 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM228AQ86W67 206 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 NUDT13Q86X67 352 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 GAS2L3Q86XJ1 694 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PROSER1Q86XN7 944 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ZDHHC21Q8IVQ6 265 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ITPRIPQ8IWB1 547 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM114A1Q8IWE2 563 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 FOXRED2Q8IWF2 684 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ABI1Q8IZP0 508 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CENPLQ8N0S6 344 aaPredicted RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ARMC10Q8N2F6 343 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 UBE2J2Q8N2K1 259 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 SIRT6Q8N6T7 355 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 C12orf50Q8NA57 414 aaPredicted RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 RNF169Q8NCN4 708 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 LINC00116Q8NCU8 138 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 BPIFCQ8NFQ6 507 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 OR6S1Q8NH40 331 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC20A1Q8WUM9 679 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF480Q8WV37 535 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 MAIP1Q8WWC4 291 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CKAP2Q8WWK9 683 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 OR1E3Q8WZA6 343 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CNOT9Q92600 299 aaKnown RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 KIFAP3Q92845 792 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 TNFRSF25Q93038 417 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 MCUR1Q96AQ8 359 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ARRDC3Q96B67 414 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CHMP6Q96FZ7 201 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 LINC00615Q96LM1 132 aaPredicted RBP3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 ZSWIM3Q96MP5 696 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 NECTIN4Q96NY8 510 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 QRFPRQ96P65 431 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 KLHL5Q96PQ7 755 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 PANX2Q96RD6 677 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 CHP1Q99653 195 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 DPYSL5Q9BPU6 564 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 C11orf70Q9BRQ4 267 aa3.13□□□□□ -1.91
CTDSPL-203ENST00000416688 WDR83Q9BRX9 315 aaKnown RBP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms