RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 PHPT1Q9NRX4 125 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-207ENST00000415107 DNAAF2Q9NVR5 837 aaKnown RBP11.86□□□□□ -0.51
ATG4B-207ENST00000415107 ARL5AQ9Y689 179 aa11.86□□□□□ -0.51
ATG4B-207ENST00000415107 TP53BP1Q12888 1972 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-207ENST00000415107 RIF1Q5UIP0 2472 aaKnown RBP11.86□□□□□ -0.51
ATG4B-207ENST00000415107 FRYLO94915 3013 aa11.86□□□□□ -0.51
ATG4B-207ENST00000415107 EP300Q09472 2414 aaPredicted RBP11.86□□□□□ -0.51
ATG4B-207ENST00000415107 GLYATL1P3A0A0U1RQE8 302 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 A0A0U1RQS6 177 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 A0A1B0GVT2 93 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 MAGEB16A2A368 324 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 K7ESM1 405 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 CACNB4O00305 520 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-207ENST00000415107 CFIP05156 583 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 PCCBP05166 539 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 NME1P15531 152 aaKnown RBP11.85□□□□□ -0.51
ATG4B-207ENST00000415107 ENGP17813 658 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 GPR1P46091 355 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 IRX4P78413 519 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 XIAPP98170 497 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 POU6F1Q14863 301 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 SKIDA1Q1XH10 827 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 IZUMO3Q5VZ72 239 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 RAET1GQ6H3X3 334 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 C8orf74Q6P047 294 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 RFLNAQ6ZTI6 216 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 SPATS2Q86XZ4 545 aaKnown RBP11.85□□□□□ -0.51
ATG4B-207ENST00000415107 PELI3Q8N2H9 469 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 TAB3Q8N5C8 712 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-207ENST00000415107 OR4K2Q8NGD2 314 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 OR13J1Q8NGT2 312 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 SCAMP4Q969E2 229 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 FUBP1Q96AE4 644 aaKnown RBP11.85□□□□□ -0.51
ATG4B-207ENST00000415107 LRRC39Q96DD0 335 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 WDR92Q96MX6 357 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 ELF4Q99607 663 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-207ENST00000415107 TRIM51Q9BSJ1 452 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 RIOK2Q9BVS4 552 aaKnown RBP11.85□□□□□ -0.51
ATG4B-207ENST00000415107 TREX1Q9NSU2 369 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 VPS18Q9P253 973 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 CNOT6Q9ULM6 557 aaKnown RBP11.85□□□□□ -0.51
ATG4B-207ENST00000415107 SOX13Q9UN79 622 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 SLC17A4Q9Y2C5 497 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 CA5BQ9Y2D0 317 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 UTP11Q9Y3A2 253 aaKnown RBP11.85□□□□□ -0.51
ATG4B-207ENST00000415107 PCDHGB2Q9Y5G2 931 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 DGKBQ9Y6T7 804 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 RALGAPA1Q6GYQ0 2036 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 LRP4O75096 1905 aa11.85□□□□□ -0.51
ATG4B-207ENST00000415107 ZFHX2Q9C0A1 2572 aaPredicted RBP11.85□□□□□ -0.51
ATG4B-207ENST00000415107 TRBV5-4A0A0C4DH59 114 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 A0A1B0GTQ1 180 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 FAM237BA0A1B0GVD1 139 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 FADS2P1A8MWK0 482 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 E7ESA3 106 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 PCDHGA12O60330 932 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 CSF2P04141 144 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 RPL21P46778 160 aaKnown RBP11.84□□□□□ -0.51
ATG4B-207ENST00000415107 BLKP51451 505 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 THOP1P52888 689 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 CAV1Q03135 178 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 SLC14A1Q13336 389 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 PEX6Q13608 980 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 PDE1CQ14123 709 aaPredicted RBP11.84□□□□□ -0.51
ATG4B-207ENST00000415107 FZD2Q14332 565 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 GPR33Q49SQ1 333 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 CERCAMQ5T4B2 595 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 TSTD2Q5T7W7 516 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 DENND2CQ68D51 928 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 DBX2Q6ZNG2 339 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 TMEM135Q86UB9 458 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 HEATR4Q86WZ0 1026 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 SDR16C5Q8N3Y7 309 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 DDHD1Q8NEL9 900 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 PPHLN1Q8NEY8 458 aaKnown RBP11.84□□□□□ -0.51
ATG4B-207ENST00000415107 BTN2A2Q8WVV5 523 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 SCG3Q8WXD2 468 aaKnown RBP11.84□□□□□ -0.51
ATG4B-207ENST00000415107 FAM122AQ96E09 287 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 CDKN2AIPNLQ96HQ2 116 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 HIC2Q96JB3 615 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 DNAJC1Q96KC8 554 aaKnown RBP11.84□□□□□ -0.51
ATG4B-207ENST00000415107 AGAP2Q99490 1192 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 MYOCQ99972 504 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 NAT9Q9BTE0 207 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 FOXP3Q9BZS1 431 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 RMI1Q9H9A7 625 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 GRHL1Q9NZI5 618 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 CD84Q9UIB8 345 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 SNX11Q9Y5W9 270 aa11.84□□□□□ -0.51
ATG4B-207ENST00000415107 SDR42E2A6NKP2 422 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 CDX4O14627 284 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-207ENST00000415107 EIF3HO15372 352 aaKnown RBP eCLIP11.83□□□□□ -0.52
ATG4B-207ENST00000415107 SRP72O76094 671 aaKnown RBP11.83□□□□□ -0.52
ATG4B-207ENST00000415107 PRAMEF1O95521 474 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 IVLP07476 585 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 TPH1P17752 444 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 EPHA8P29322 1005 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-207ENST00000415107 ARRB1P49407 418 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-207ENST00000415107 CCT8P50990 548 aa11.83□□□□□ -0.52
ATG4B-207ENST00000415107 ITGA8P53708 1063 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms