RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 FAM136AQ96C01 138 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 LCORQ96JN0 433 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 CDRT15Q96T59 188 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 NUDT22Q9BRQ3 303 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 IFT27Q9BW83 186 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 KRT23Q9C075 422 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 DEFB129Q9H1M3 183 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 AAMDCQ9H7C9 122 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 TBC1D17Q9HA65 648 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 SLC35C2Q9NQQ7 365 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 DDX43Q9NXZ2 648 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 ABI3Q9P2A4 366 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 CTTNBP2NLQ9P2B4 639 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 UPB1Q9UBR1 384 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 RNF150Q9ULK6 438 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 OAZ3Q9UMX2 235 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 DHDHQ9UQ10 334 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 MYH2Q9UKX2 1941 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 SALL3Q9BXA9 1300 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 OR2A25A4D2G3 310 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 SUV39H1O43463 412 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 TRIAP1O43715 76 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 KLHL41O60662 606 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 SUPT20HL2P0C7V6 817 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 INSRRP14616 1297 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 ARSAP15289 507 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 ITPKBP27987 946 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 SLC8A1P32418 973 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 GP5P40197 560 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 ACAA2P42765 397 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 EIF3BP55884 814 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 MZT1Q08AG7 82 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 GRIK3Q13003 919 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 THOC5Q13769 683 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 CRYMQ14894 314 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 CLCA4Q14CN2 919 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 RSPO4Q2I0M5 234 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 KCNT1Q5JUK3 1230 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 PLEKHS1Q5SXH7 462 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 IYDQ6PHW0 289 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 LCTLQ6UWM7 567 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 NAPRTQ6XQN6 538 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 Q6ZRM9 215 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 TMEM200AQ86VY9 491 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 METTL23Q86XA0 190 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 PEX5LQ8IYB4 626 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 RBM15BQ8NDT2 890 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 SPATA18Q8TC71 538 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 GRK7Q8WTQ7 553 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 MMABQ96EY8 250 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 PIWIL1Q96J94 861 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 PNKPQ96T60 521 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 ABHD14AQ9BUJ0 271 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 KATNB1Q9BVA0 655 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 MARCH4Q9P2E8 410 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 TESQ9UGI8 421 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 CA14Q9ULX7 337 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 SLC8A2Q9UPR5 921 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 WBP11Q9Y2W2 641 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 TRGV11A0A075B6L2 103 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 LOC102723996A0A087X1L8 192 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 ZNF503-AS2A6NEH8 195 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 KIF2AO00139 706 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 SPRY2O43597 315 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 VNN2O95498 520 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 GUCA1CO95843 209 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 ITGB2P05107 769 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 HOXB7P09629 217 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 FCGR2AP12318 317 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 PDGFRAP16234 1089 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 TRIM21P19474 475 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 ITGAXP20702 1163 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 LORP23490 312 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 KLHL30Q0D2K2 578 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 CCDC15Q0P6D6 951 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 VGLL4Q14135 290 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 MFSD13AQ14CX5 517 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 RAB41Q5JT25 222 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 KRT39Q6A163 491 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 NCEH1Q6PIU2 408 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 KYAT3Q6YP21 454 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 SPATA21Q7Z572 469 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 TMPRSS6Q8IU80 811 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 ADGRF3Q8IZF5 1079 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 SIX6OS1Q8N1H7 587 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 TMEM217Q8N7C4 229 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 DEPDC1BQ8WUY9 529 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 DEFB118Q96PH6 123 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 GPR87Q9BY21 358 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 ZNF768Q9H5H4 540 aaKnown RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 RANGRFQ9HD47 186 aaPredicted RBP2.61□□□□□ -1.99
MCF2-204ENST00000414978 CD207Q9UJ71 328 aa2.61□□□□□ -1.99
MCF2-204ENST00000414978 UTYO14607 1347 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 CCDC188H7C350 402 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 FOXD2O60548 495 aaPredicted RBP2.6□□□□□ -1.99
MCF2-204ENST00000414978 LPXNO60711 386 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 CYP7B1O75881 506 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 TRIM16O95361 564 aa2.6□□□□□ -1.99
MCF2-204ENST00000414978 IPO7O95373 1038 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms