RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 PCGF3Q3KNV8 242 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 C9orf57Q5W0N0 161 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 WDR73Q6P4I2 378 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 CCNI2Q6ZMN8 369 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 KRBA2Q6ZNG9 492 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 ARMC9Q7Z3E5 817 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 TICAM1Q8IUC6 712 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 BEST3Q8N1M1 668 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 WDTC1Q8N5D0 677 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 RBMXL3Q8N7X1 1067 aaKnown RBP3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 LILRB1Q8NHL6 650 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 SCFD2Q8WU76 684 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 TANKQ92844 425 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 TAAR8Q969N4 342 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 BICD1Q96G01 975 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 FAM84BQ96KN1 310 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 CMTM3Q96MX0 182 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 CSF3RQ99062 836 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 C6orf106Q9H6K1 298 aaPredicted RBP3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 SH2D4AQ9H788 454 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 KAT14Q9H8E8 782 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 SLC28A3Q9HAS3 691 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 EIF2B3Q9NR50 452 aaKnown RBP3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 SEPT11Q9NVA2 429 aaKnown RBP3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 SIX4Q9UIU6 781 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 FBXW11Q9UKB1 542 aa3.79□□□□□ -1.8
HMGB1P11-201ENST00000413899 SETD1BQ9UPS6 1966 aaKnown RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 KIF21BO75037 1637 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 CDRT15L2A8MXV6 281 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 MID1O15344 667 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 SPINT2O43291 252 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 DOK2O60496 412 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 HNRNPCL1O60812 293 aaKnown RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 TIPRLO75663 272 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 PAPSS2O95340 614 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 ZBTB11O95625 1053 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 ITGB6P18564 788 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 PPARGP37231 505 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 PSMB10P40306 273 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 PRCPP42785 496 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 CLNS1AP54105 237 aaKnown RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 DRG2P55039 364 aaKnown RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 SF3B4Q15427 424 aaKnown RBP eCLIP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 ASTE1Q2TB18 679 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 ZNF585BQ52M93 769 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 DCST1Q5T197 706 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 PMS2CLQ68D20 193 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 LCN10Q6JVE6 187 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 KIAA1161Q6NSJ0 714 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 DUS1LQ6P1R4 473 aaKnown RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 BRAT1Q6PJG6 821 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 NRROSQ86YC3 692 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 RPAP2Q8IXW5 612 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 ADGRF2Q8IZF7 708 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 SRBD1Q8N5C6 995 aaKnown RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 PCDH20Q8N6Y1 951 aaKnown RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 OR2AK2Q8NG84 335 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 TRPC4APQ8TEL6 797 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 APBB2Q92870 758 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 GRAMD2BQ96HH9 432 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 CCDC34Q96HJ3 373 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 ADGRG7Q96K78 797 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 C3orf30Q96M34 536 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 TIGD1Q96MW7 591 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 DUX5Q96PT3 197 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 OR2A14Q96R47 310 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 SIL1Q9H173 461 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 SEBOXQ9HB31 216 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 CLIC4Q9Y696 253 aa3.78□□□□□ -1.8
HMGB1P11-201ENST00000413899 CUX1P39880 1505 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 RUSC2Q8N2Y8 1516 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 C1orf226A1L170 272 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 FSD2A1L4K1 749 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 ANKRD18BA2A2Z9 1011 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 AGAP14A8MT82 685 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 M0QZ24 198 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 SLC16A5O15375 505 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 EGFP01133 1207 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 ACTN1P12814 892 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 TMEM11P17152 192 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 ACADLP28330 430 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 CCKBRP32239 447 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 HOXD13P35453 343 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 PIK3CAP42336 1068 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 TAS2R38P59533 333 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 FOXM1Q08050 763 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 ACSM2AQ08AH3 577 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 LRMPQ12912 555 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 SNTA1Q13424 505 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 NAB2Q15742 525 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 PNLIPRP3Q17RR3 467 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 ZNF805Q5CZA5 627 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 LRIF1Q5T3J3 769 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 GKAP1Q5VSY0 366 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 ACSM2BQ68CK6 577 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 ZNF280DQ6N043 979 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 TRNP1Q6NT89 227 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 PRSS57Q6UWY2 283 aa3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P11-201ENST00000413899 CFAP77Q6ZQR2 320 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms