RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 MAN2B2Q9Y2E5 1009 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 TMEM98Q9Y2Y6 226 aa12.09□□□□□ -0.47
LIMS2-210ENST00000413578 PRPSAP2O60256 369 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 DNAJC6O75061 913 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 MAP3K6O95382 1288 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 TPM2P07951 284 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 PDHA1P08559 390 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 FERP16591 822 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 NFKBIAP25963 317 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 GPR1P46091 355 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 MAXP61244 160 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 PTSQ03393 145 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 IHHQ14623 411 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 PPP1R2P3Q6NXS1 205 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 RBM43Q6ZSC3 357 aaKnown RBP12.08□□□□□ -0.48
LIMS2-210ENST00000413578 USP45Q70EL2 814 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 POLNQ7Z5Q5 900 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 UNC5BQ8IZJ1 945 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 OR10G6Q8NH81 332 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 APOBEC4Q8WW27 367 aaKnown RBP12.08□□□□□ -0.48
LIMS2-210ENST00000413578 AP2M1Q96CW1 435 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 SLC38A3Q99624 504 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 CTRCQ99895 268 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 ZPBPQ9BS86 351 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 EFHD1Q9BUP0 239 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 HSD3B7Q9H2F3 369 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 SARS2Q9NP81 518 aaKnown RBP12.08□□□□□ -0.48
LIMS2-210ENST00000413578 ZNF71Q9NQZ8 489 aaPredicted RBP12.08□□□□□ -0.48
LIMS2-210ENST00000413578 SIDT1Q9NXL6 827 aaKnown RBP12.08□□□□□ -0.48
LIMS2-210ENST00000413578 CD84Q9UIB8 345 aa12.08□□□□□ -0.48
LIMS2-210ENST00000413578 ZFC3H1O60293 1989 aaKnown RBP12.07□□□□□ -0.48
LIMS2-210ENST00000413578 GOLGA6CA6NDK9 693 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 GOLGA6BA6NDN3 693 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 STK17BO94768 372 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 ANKRD34CP0C6C1 535 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 GOLGA6DP0CG33 693 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 PRKAR1AP10644 381 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 TCF4P15884 667 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 CTPS1P17812 591 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 PCK1P35558 622 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 CD97P48960 835 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 EPHA4P54764 986 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 UBXN1Q04323 297 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 MAP7Q14244 749 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 ARMC12Q5T9G4 340 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 LRRC66Q68CR7 880 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 ALG1LQ6GMV1 187 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 IYDQ6PHW0 289 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 CEACAM20Q6UY09 585 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 GALNT13Q8IUC8 556 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 NRSN1Q8IZ57 195 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 TEX26Q8N6G2 289 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 STARD8Q92502 1023 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 MIB2Q96AX9 1013 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 CSPG4P5Q96PW8 444 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 WDR24Q96S15 920 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 ZWILCHQ9H900 591 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 GOLGA6AQ9NYA3 693 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 VPS18Q9P253 973 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 UNC79Q9P2D8 2635 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 TBC1D29Q9UFV1 150 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 CNOT6Q9ULM6 557 aaKnown RBP12.07□□□□□ -0.48
LIMS2-210ENST00000413578 MYO6Q9UM54 1294 aa12.07□□□□□ -0.48
LIMS2-210ENST00000413578 TRBV23OR9-2A0A075B6M9 112 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 A0A0J9YYE9 177 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 TMCO5BA8MYB1 307 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 RNF8O76064 485 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 TRBC1P01850 177 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 PYGLP06737 847 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 CCDC172P0C7W6 258 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 ZNF30P17039 623 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 AMPD1P23109 780 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 F8A1P23610 371 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 STAT5AP42229 794 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 MMP13P45452 471 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 STC1P52823 247 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 CDH6P55285 790 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 HHEXQ03014 270 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 NCAPHQ15003 741 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 ATP1A1-AS1Q5TC04 95 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 MARC1Q5VT66 337 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 TMCO3Q6UWJ1 677 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 MARK2Q7KZI7 788 aaKnown RBP12.06□□□□□ -0.48
LIMS2-210ENST00000413578 RAVER1Q8IY67 606 aaKnown RBP12.06□□□□□ -0.48
LIMS2-210ENST00000413578 FAM26EQ8N5C1 309 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 EXD1Q8NHP7 514 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 KIAA1143Q96AT1 154 aaPredicted RBP12.06□□□□□ -0.48
LIMS2-210ENST00000413578 AHCYL2Q96HN2 611 aaKnown RBP12.06□□□□□ -0.48
LIMS2-210ENST00000413578 PCMTD1Q96MG8 357 aaPredicted RBP12.06□□□□□ -0.48
LIMS2-210ENST00000413578 TRIT1Q9H3H1 467 aaKnown RBP12.06□□□□□ -0.48
LIMS2-210ENST00000413578 PLAAQ9Y263 795 aa12.06□□□□□ -0.48
LIMS2-210ENST00000413578 OAS3Q9Y6K5 1087 aaKnown RBP12.06□□□□□ -0.48
LIMS2-210ENST00000413578 MN1Q10571 1320 aaPredicted RBP12.06□□□□□ -0.48
LIMS2-210ENST00000413578 LILRA5A6NI73 299 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 A8MU76 341 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 H3BRJ5 948 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 PRLP01236 227 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 GZMAP12544 262 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 MAN1A1P33908 653 aa12.05□□□□□ -0.48
LIMS2-210ENST00000413578 UBE2IP63279 158 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms