RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 BBS5Q8N3I7 341 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 ZNF843Q8N446 348 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 FITM2Q8N6M3 262 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 GABPB2Q8TAK5 448 aaPredicted RBP17.13■□□□□ 0.33
PTPRC-206ENST00000413409 CEP76Q8TAP6 659 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 ARRDC2Q8TBH0 407 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 OSCP1Q8WVF1 389 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 MYEOVQ96EZ4 313 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 VPS39Q96JC1 886 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 FEM1CQ96JP0 617 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 PRICKLE1Q96MT3 831 aaPredicted RBP17.13■□□□□ 0.33
PTPRC-206ENST00000413409 AGAP2Q99490 1192 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 KLF16Q9BXK1 252 aaPredicted RBP17.13■□□□□ 0.33
PTPRC-206ENST00000413409 NPHS2Q9NP85 383 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 POLMQ9NP87 494 aaPredicted RBP17.13■□□□□ 0.33
PTPRC-206ENST00000413409 ZMYM5Q9UJ78 669 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 MID2Q9UJV3 735 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 PCDHB9Q9Y5E1 797 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 SPTA1P02549 2419 aa17.13■□□□□ 0.33
PTPRC-206ENST00000413409 GOLGA4Q13439 2230 aaKnown RBP17.12■□□□□ 0.33
PTPRC-206ENST00000413409 ATXN7O15265 892 aaPredicted RBP17.12■□□□□ 0.33
PTPRC-206ENST00000413409 CORO1AP31146 461 aaKnown RBP17.12■□□□□ 0.33
PTPRC-206ENST00000413409 ACVRL1P37023 503 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 DPP6P42658 865 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 SERPINH1P50454 418 aaKnown RBP17.12■□□□□ 0.33
PTPRC-206ENST00000413409 TMPRSS15P98073 1019 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 DSC2Q02487 901 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 GNA12Q03113 381 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 MESP2Q0VG99 397 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 BST1Q10588 318 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 LAMB3Q13751 1172 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 CHI3L2Q15782 390 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 ZNF77Q15935 545 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 TAF12Q16514 161 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 CCDC91Q7Z6B0 441 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 GALNT7Q86SF2 657 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 ZC3HC1Q86WB0 502 aaKnown RBP17.12■□□□□ 0.33
PTPRC-206ENST00000413409 LURAP1LQ8IV03 231 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 NAXDQ8IW45 347 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 SPACA7Q96KW9 195 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 SLC22A12Q96S37 553 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 STOML2Q9UJZ1 356 aa17.12■□□□□ 0.33
PTPRC-206ENST00000413409 HELZP42694 1942 aaKnown RBP17.11■□□□□ 0.33
PTPRC-206ENST00000413409 ANAPC1Q9H1A4 1944 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 PLXND1Q9Y4D7 1925 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 OBSL1O75147 1896 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 A0A1B0GVM2 712 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 LOC285095A0A1B0GVY8 99 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 ILVBLA1L0T0 632 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 TCAF2A6NFQ2 919 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 H0YHG0 523 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 CBFA2T3O75081 653 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 ATP5HO75947 161 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 GSRP00390 522 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 EPOP01588 193 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 FGF1P05230 155 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 ATP5BP06576 529 aaKnown RBP17.11■□□□□ 0.33
PTPRC-206ENST00000413409 APOA4P06727 396 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 HLA-DPA1P20036 260 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 ARNTP27540 789 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 ETFBP38117 255 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 NCALDP61601 193 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 SLC14A1Q13336 389 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 ZNF783Q6ZMS7 281 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 TMPRSS7Q7RTY8 843 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 SETD3Q86TU7 594 aaPredicted RBP17.11■□□□□ 0.33
PTPRC-206ENST00000413409 PGBD5Q8N414 524 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 TXNDC5Q8NBS9 432 aaKnown RBP17.11■□□□□ 0.33
PTPRC-206ENST00000413409 C2CD4AQ8NCU7 369 aaPredicted RBP17.11■□□□□ 0.33
PTPRC-206ENST00000413409 TTC16Q8NEE8 873 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 CALML6Q8TD86 181 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 PEX13Q92968 403 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 ZNF778Q96MU6 729 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 MGME1Q9BQP7 344 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 SIKE1Q9BRV8 207 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 MECRQ9BV79 373 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 TXLNGQ9NUQ3 528 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 SEPT3Q9UH03 358 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 CHKBQ9Y259 395 aa17.11■□□□□ 0.33
PTPRC-206ENST00000413409 MTO1Q9Y2Z2 717 aaKnown RBP17.11■□□□□ 0.33
PTPRC-206ENST00000413409 TRABD2BA6NFA1 517 aa17.1■□□□□ 0.33
PTPRC-206ENST00000413409 OLFM2O95897 454 aa17.1■□□□□ 0.33
PTPRC-206ENST00000413409 PRKCGP05129 697 aa17.1■□□□□ 0.33
PTPRC-206ENST00000413409 ATXN1LP0C7T5 689 aaKnown RBP17.1■□□□□ 0.33
PTPRC-206ENST00000413409 DDX6P26196 483 aaKnown RBP eCLIP17.1■□□□□ 0.33
PTPRC-206ENST00000413409 CHRNA4P43681 627 aa17.1■□□□□ 0.33
PTPRC-206ENST00000413409 MAXP61244 160 aa17.1■□□□□ 0.33
PTPRC-206ENST00000413409 ITKQ08881 620 aa17.1■□□□□ 0.33
PTPRC-206ENST00000413409 MSLNQ13421 630 aaPredicted RBP17.1■□□□□ 0.33
PTPRC-206ENST00000413409 THOC5Q13769 683 aaKnown RBP17.1■□□□□ 0.33
PTPRC-206ENST00000413409 SEPT6Q14141 434 aa17.1■□□□□ 0.33
PTPRC-206ENST00000413409 PCLAFQ15004 111 aa17.1■□□□□ 0.33
PTPRC-206ENST00000413409 PCSK7Q16549 785 aa17.1■□□□□ 0.33
PTPRC-206ENST00000413409 FASTKD1Q53R41 847 aaKnown RBP17.1■□□□□ 0.33
PTPRC-206ENST00000413409 TAF1BQ53T94 588 aaPredicted RBP17.1■□□□□ 0.33
PTPRC-206ENST00000413409 ADGRF1Q5T601 910 aa17.1■□□□□ 0.33
PTPRC-206ENST00000413409 TSTD2Q5T7W7 516 aa17.1■□□□□ 0.33
PTPRC-206ENST00000413409 MBLAC2Q68D91 279 aa17.1■□□□□ 0.33
PTPRC-206ENST00000413409 ESRP1Q6NXG1 681 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms