RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 KCNH1O95259 989 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 IL6P05231 212 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 SPATA31D3P0C874 917 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 MATN1P21941 496 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 MGAT5Q09328 741 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 CDH17Q12864 832 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 GNA13Q14344 377 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 DCLRE1AQ6PJP8 1040 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 DPY19L3Q6ZPD9 716 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 SPATA31D4Q6ZUB0 917 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 DENND6AQ8IWF6 608 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 FIBCD1Q8N539 461 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 NIFKQ9BYG3 293 aaKnown RBP8.49□□□□□ -1.05
PBRM1-209ENST00000412587 SIAEQ9HAT2 523 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 PNMA8BQ9ULN7 279 aaPredicted RBP8.49□□□□□ -1.05
PBRM1-209ENST00000412587 TESMINQ9Y4I5 508 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 ARHGEF33A8MVX0 844 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 APOC4-APOC2K7ER74 178 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 SUPT7LO94864 414 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 APOC2P02655 101 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 ERP29P30040 261 aaKnown RBP8.49□□□□□ -1.05
PBRM1-209ENST00000412587 ELK3P41970 407 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 PPP3CCP48454 512 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 NFATC3Q12968 1075 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 POU6F1Q14863 301 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 RAB39AQ14964 217 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 DGKKQ5KSL6 1271 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 KATNAL2Q8IYT4 538 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 SLC4A11Q8NBS3 891 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 LPCAT1Q8NF37 534 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 NODALQ96S42 347 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 PCDHB16Q9NRJ7 776 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 INIPQ9NRY2 104 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 DNAJC28Q9NX36 388 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 POLHQ9Y253 713 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 GRIP1Q9Y3R0 1128 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 H0YJX3 145 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 GLP2RO95838 553 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 CYP1A1P04798 512 aaPredicted RBP8.49□□□□□ -1.05
PBRM1-209ENST00000412587 ASGR1P07306 291 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 PTPN2P17706 415 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 RCVRNP35243 200 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 PTGIRP43119 386 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 CD83Q01151 205 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 TUSC3Q13454 348 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 MAMLD1Q13495 774 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 NFYCQ13952 458 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 GRM2Q14416 872 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 ARMC6Q6NXE6 501 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 GALNT11Q8NCW6 608 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 TMEM168Q9H0V1 697 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 PPA2Q9H2U2 334 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 ATP13A3Q9H7F0 1226 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 KAT8Q9H7Z6 458 aaKnown RBP8.49□□□□□ -1.05
PBRM1-209ENST00000412587 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.49□□□□□ -1.05
PBRM1-209ENST00000412587 PCDHGC3Q9UN70 934 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 SNX8Q9Y5X2 465 aa8.49□□□□□ -1.05
PBRM1-209ENST00000412587 CHD2O14647 1828 aaKnown RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 FAM240BA0A1B0GVZ2 78 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 SYNDIG1LA6NDD5 238 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 TRDMT1O14717 391 aaKnown RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 DDX3YO15523 660 aaKnown RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 TREHO43280 583 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 GLDCP23378 1020 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 KDELR1P24390 212 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 CYP2C18P33260 490 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 MSX2P35548 267 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 RPS9P46781 194 aaKnown RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 CLK2P49760 499 aaKnown RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 FMO1Q01740 532 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 USP41Q3LFD5 358 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 SPDYE7PQ495Y7 208 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 HECTD3Q5T447 861 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 OR5H6Q8NGV6 325 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 FAM45AQ8TCE6 357 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 ARL5BQ96KC2 179 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 FAM84AQ96KN4 292 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 IKZF4Q9H2S9 585 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF556Q9HAH1 456 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 MAT2BQ9NZL9 334 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 RBPJLQ9UBG7 517 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 DNPEPQ9ULA0 475 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 ACOT9Q9Y305 439 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 PTCH2Q9Y6C5 1203 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 MYOCOSA0A1B0GUC4 107 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF99A8MXY4 864 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 HACD1B0YJ81 288 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 DHFRP00374 187 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 CTNNB1P35222 781 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 HPCAL1P37235 193 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF143P52747 638 aaPredicted RBP8.48□□□□□ -1.05
PBRM1-209ENST00000412587 CDK18Q07002 472 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 DSC3Q14574 896 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 STARD3Q14849 445 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 COLEC12Q5KU26 742 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 CORO6Q6QEF8 472 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 IDO2Q6ZQW0 420 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 FAM183BPQ6ZVS7 135 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 TRIM48Q8IWZ4 208 aa8.48□□□□□ -1.05
PBRM1-209ENST00000412587 ZNF540Q8NDQ6 660 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms