RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 NAP1L1P55209 391 aaKnown RBP17.29■□□□□ 0.36
HSPG2-204ENST00000412328 WNT3AP56704 352 aa17.29■□□□□ 0.36
HSPG2-204ENST00000412328 E2F1Q01094 437 aa17.29■□□□□ 0.36
HSPG2-204ENST00000412328 TARDBPQ13148 414 aaKnown RBP eCLIP17.29■□□□□ 0.361e-8■■■■■ 27.7
HSPG2-204ENST00000412328 OGFOD3Q6PK18 319 aa17.29■□□□□ 0.36
HSPG2-204ENST00000412328 PEX26Q7Z412 305 aa17.29■□□□□ 0.36
HSPG2-204ENST00000412328 KDELC2Q7Z4H8 507 aa17.29■□□□□ 0.36
HSPG2-204ENST00000412328 GKN2Q86XP6 184 aa17.29■□□□□ 0.36
HSPG2-204ENST00000412328 TTC30BQ8N4P2 665 aa17.29■□□□□ 0.36
HSPG2-204ENST00000412328 GPR26Q8NDV2 337 aa17.29■□□□□ 0.36
HSPG2-204ENST00000412328 MDM1Q8TC05 714 aa17.29■□□□□ 0.36
HSPG2-204ENST00000412328 CARS2Q9HA77 564 aaKnown RBP17.29■□□□□ 0.36
HSPG2-204ENST00000412328 FAM153AQ9UHL3 310 aa17.29■□□□□ 0.36
HSPG2-204ENST00000412328 AMFRQ9UKV5 643 aa17.29■□□□□ 0.36
HSPG2-204ENST00000412328 PIKFYVEQ9Y2I7 2098 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 CHD6Q8TD26 2715 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 TCRBV7S2A1N4TA0A589 114 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 RGSL1A5PLK6 1076 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 TRABD2BA6NFA1 517 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 F5H423 210 aaPredicted RBP17.28■□□□□ 0.36
HSPG2-204ENST00000412328 PDE2AO00408 941 aaPredicted RBP17.28■□□□□ 0.36
HSPG2-204ENST00000412328 DNAJC6O75061 913 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 RBP3P10745 1247 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 CTSEP14091 401 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 SIRPB2Q5JXA9 342 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 ZNF662Q6ZS27 426 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 CDKL3Q8IVW4 592 aaPredicted RBP17.28■□□□□ 0.36
HSPG2-204ENST00000412328 SYCE1Q8N0S2 351 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 RNF10Q8N5U6 811 aaKnown RBP17.28■□□□□ 0.36
HSPG2-204ENST00000412328 HIC2Q96JB3 615 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 ZFYVE1Q9HBF4 777 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 TRNAU1APQ9NX07 287 aaKnown RBP17.28■□□□□ 0.36
HSPG2-204ENST00000412328 PKD2L2Q9NZM6 624 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 VPS18Q9P253 973 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 TRHDEQ9UKU6 1024 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 SHOC2Q9UQ13 582 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 CLCA2Q9UQC9 943 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 R3HDM2Q9Y2K5 976 aaKnown RBP17.28■□□□□ 0.36
HSPG2-204ENST00000412328 PCDHB1Q9Y5F3 818 aa17.28■□□□□ 0.36
HSPG2-204ENST00000412328 A0A1W2PNU3 283 aaPredicted RBP17.27■□□□□ 0.36
HSPG2-204ENST00000412328 GOLGA6CA6NDK9 693 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 GOLGA6BA6NDN3 693 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 NTN3O00634 580 aaPredicted RBP17.27■□□□□ 0.36
HSPG2-204ENST00000412328 MT-CO3P00414 261 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 EPOP01588 193 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 PYGLP06737 847 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 GOLGA6DP0CG33 693 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 ADRA1AP35348 466 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 EIF3EP60228 445 aaKnown RBP17.27■□□□□ 0.36
HSPG2-204ENST00000412328 MPP3Q13368 585 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 MSLNQ13421 630 aaPredicted RBP17.27■□□□□ 0.36
HSPG2-204ENST00000412328 HLTFQ14527 1009 aaKnown RBP eCLIP17.27■□□□□ 0.36
HSPG2-204ENST00000412328 RTP5Q14D33 572 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 SLC1A5Q15758 541 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 PYCR3Q53H96 274 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 CERCAMQ5T4B2 595 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 TXLNBQ8N3L3 684 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 PDCD7Q8N8D1 485 aaKnown RBP17.27■□□□□ 0.36
HSPG2-204ENST00000412328 CCDC112Q8NEF3 446 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 NAT6Q93015 286 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 GOLGA6AQ9NYA3 693 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 SIRPGQ9P1W8 387 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 RSPH14Q9UHP6 348 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 TMPRSS11EQ9UL52 423 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 PADI4Q9UM07 663 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 GPR34Q9UPC5 381 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 TMEM98Q9Y2Y6 226 aa17.27■□□□□ 0.36
HSPG2-204ENST00000412328 NBEAQ8NFP9 2946 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 CPED1A4D0V7 1026 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 SRRM3A6NNA2 597 aaPredicted RBP17.26■□□□□ 0.35
HSPG2-204ENST00000412328 H7C0C1 242 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 GAPDHSO14556 408 aaPredicted RBP17.26■□□□□ 0.35
HSPG2-204ENST00000412328 INPP4BO15327 924 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 TJP3O95049 919 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 BPIP17213 487 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 AK4P27144 223 aaPredicted RBP17.26■□□□□ 0.35
HSPG2-204ENST00000412328 PSMB4P28070 264 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 ADCY8P40145 1251 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 GNPDA1P46926 289 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 ATP5OP48047 213 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 ANKRD20A2Q5SQ80 823 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 ANKRD20A1Q5TYW2 823 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 ANKRD20A3Q5VUR7 823 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 DOK6Q6PKX4 331 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 PID1Q7Z2X4 250 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 LRRC8AQ8IWT6 810 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 SLC35B2Q8TB61 432 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 MAPK15Q8TD08 544 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 CCDC74AQ96AQ1 378 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 NXPE2Q96DL1 559 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 OR2M4Q96R27 311 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 CCDC3Q9BQI4 270 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 NRSN2Q9GZP1 204 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 FAM83DQ9H4H8 585 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 SPATS2LQ9NUQ6 558 aaKnown RBP17.26■□□□□ 0.35
HSPG2-204ENST00000412328 EVA1BQ9NVM1 165 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 PLEKHM1Q9Y4G2 1056 aa17.26■□□□□ 0.35
HSPG2-204ENST00000412328 A0A1W2PQM1 296 aa17.25■□□□□ 0.35
HSPG2-204ENST00000412328 GOLGA6L6A8MZA4 724 aa17.25■□□□□ 0.35
HSPG2-204ENST00000412328 ATP1A1P05023 1023 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms