RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 SKAP1Q86WV1 359 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 CIR1Q86X95 450 aaPredicted RBP6.96□□□□□ -1.3
UBE2F-204ENST00000409953 NRROSQ86YC3 692 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 DMRTC2Q8IXT2 367 aaPredicted RBP6.96□□□□□ -1.3
UBE2F-204ENST00000409953 CCAR2Q8N163 923 aaKnown RBP6.96□□□□□ -1.3
UBE2F-204ENST00000409953 NDUFAF2Q8N183 169 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 GPD1LQ8N335 351 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 SYAP1Q96A49 352 aaPredicted RBP6.96□□□□□ -1.3
UBE2F-204ENST00000409953 RAB7BQ96AH8 199 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 ELMO3Q96BJ8 720 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 CYFIP2Q96F07 1278 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 MAGEB10Q96LZ2 347 aaPredicted RBP6.96□□□□□ -1.3
UBE2F-204ENST00000409953 SECISBP2Q96T21 854 aaKnown RBP6.96□□□□□ -1.3
UBE2F-204ENST00000409953 SLC38A3Q99624 504 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 C19orf24Q9BVV8 132 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 ST6GALNAC4Q9H4F1 302 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 STK17AQ9UEE5 414 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 MOSPD1Q9UJG1 213 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 VPS28Q9UK41 221 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 EXOC7Q9UPT5 735 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 HS3ST2Q9Y278 367 aa6.96□□□□□ -1.3
UBE2F-204ENST00000409953 TRIM64CA6NLI5 447 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 C16orf96A6NNT2 1141 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 THAP12O43422 761 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 SMAD6O43541 496 aaKnown RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 SLC19A2O60779 497 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 CUTAO60888 179 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 CDC45O75419 566 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 ENDOD1O94919 500 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 MOCS2O96007 188 aaPredicted RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 RAF1P04049 648 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 PCCBP05166 539 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 DLATP10515 647 aaKnown RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 CD19P15391 556 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 TRIM21P19474 475 aaKnown RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 MAPK9P45984 424 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 TKTL1P51854 596 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 NAP1L1P55209 391 aaKnown RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 PSMA6P60900 246 aaKnown RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 RBPJQ06330 500 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 ILF3Q12906 894 aaKnown RBP eCLIP6.95□□□□□ -1.36e-7■□□□□ 9.4
UBE2F-204ENST00000409953 PRKD1Q15139 912 aaPredicted RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 SYCP1Q15431 976 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 TAF11Q15544 211 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 WSCD2Q2TBF2 565 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 ZNF699Q32M78 642 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 INO80DQ53TQ3 878 aaPredicted RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 ZNF667Q5HYK9 610 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 LRRC73Q5JTD7 316 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 C10orf62Q5T681 223 aaPredicted RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 SHEQ5VZ18 495 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 BSPRYQ5W0U4 402 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 C22orf39Q6P5X5 142 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 SLC30A9Q6PML9 568 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 PPP1R3BQ86XI6 285 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 CBWD2Q8IUF1 395 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 SLC9A9Q8IVB4 645 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 CBARPQ8N350 705 aaPredicted RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 ENDOVQ8N8Q3 282 aaKnown RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 CLEC1AQ8NC01 280 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 CXorf40AQ8TE69 158 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 CCDC127Q96BQ5 260 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 ARHGEF26Q96DR7 871 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 ALG14Q96F25 216 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 FEM1AQ9BSK4 669 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 DUSP16Q9BY84 665 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 GSDMCQ9BYG8 508 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 ULBP1Q9BZM6 244 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 ZNF700Q9H0M5 742 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 TSPAN10Q9H1Z9 355 aaPredicted RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 CLEC4MQ9H2X3 399 aaPredicted RBP6.95□□□□□ -1.3
UBE2F-204ENST00000409953 ACBD3Q9H3P7 528 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 NEUROD4Q9HD90 331 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 NDFIP2Q9NV92 336 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 SEC14L3Q9UDX4 400 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 TMCC3Q9ULS5 477 aa6.95□□□□□ -1.3
UBE2F-204ENST00000409953 ANK3Q12955 4377 aaKnown RBP6.94□□□□□ -1.3
UBE2F-204ENST00000409953 CCDC78A2IDD5 438 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 ZNF233A6NK53 670 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 CACNB4O00305 520 aaPredicted RBP6.94□□□□□ -1.3
UBE2F-204ENST00000409953 KIF1CO43896 1103 aaKnown RBP6.94□□□□□ -1.3
UBE2F-204ENST00000409953 ATE1O95260 518 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 MYL1P05976 194 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 TPM2P07951 284 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 PYGMP11217 842 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 NEFHP12036 1026 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 TNNI1P19237 187 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 AK4P27144 223 aaPredicted RBP6.94□□□□□ -1.3
UBE2F-204ENST00000409953 ARCN1P48444 511 aaKnown RBP6.94□□□□□ -1.3
UBE2F-204ENST00000409953 SEPHS1P49903 392 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 KIAA1024LP59773 190 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 NKX6-1P78426 367 aaPredicted RBP6.94□□□□□ -1.3
UBE2F-204ENST00000409953 NUCB2P80303 420 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 PDE1BQ01064 536 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 TOB2Q14106 344 aaPredicted RBP6.94□□□□□ -1.3
UBE2F-204ENST00000409953 KEAP1Q14145 624 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 RAB41Q5JT25 222 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 IZUMO3Q5VZ72 239 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 RAP1GAP2Q684P5 730 aa6.94□□□□□ -1.3
UBE2F-204ENST00000409953 ZNF720Q7Z2F6 126 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms