RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-205	ENST00000409952	SH3GL2	Q99962	352 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	TMEM47	Q9BQJ4	181 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	PIMREG	Q9BSJ6	248 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	INPP5K	Q9BT40	448 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	ANP32E	Q9BTT0	268 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	GPR87	Q9BY21	358 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	SCAND2P	Q9GZW5	306 aa	Predicted RBP	4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	TKTL2	Q9H0I9	626 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	BPIFA1	Q9NP55	256 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	DNAJC17	Q9NVM6	304 aa	Known RBP	4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	EHD3	Q9NZN3	535 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	TRPC4	Q9UBN4	977 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	DKK3	Q9UBP4	350 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	AURKC	Q9UQB9	309 aa		4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	RPH3A	Q9Y2J0	694 aa	Predicted RBP	4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.95	□□□□□ -1.62
LSM5-205	ENST00000409952	SLC9B1P1	A6NJY1	282 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952		H3BQ06	376 aa	Predicted RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	JRK	O75564	520 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	TRIM16	O95361	564 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	VIM	P08670	466 aa	Known RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	OR52Z1	P0C646	297 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	LINGO3	P0C6S8	592 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	PFKFB1	P16118	471 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	PRLR	P16471	622 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	FER	P16591	822 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	PRPH	P41219	470 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	CRKL	P46109	303 aa	Known RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	RABIF	P47224	123 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	CYP2J2	P51589	502 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	GPR143	P51810	404 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	ATXN3	P54252	364 aa	Predicted RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	CDH13	P55290	713 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	ST8SIA6	P61647	398 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	SIRPA	P78324	504 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	MRPS34	P82930	218 aa	Known RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	RBPJ	Q06330	500 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	GRIK3	Q13003	919 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	BMPR2	Q13873	1038 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	PTPRCAP	Q14761	206 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	PDK1	Q15118	436 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	SF3B3	Q15393	1217 aa	Known RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	INA	Q16352	499 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	TAZ	Q16635	292 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	PLK5	Q496M5	336 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	C12orf60	Q5U649	245 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	LRRC8E	Q6NSJ5	796 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	QSOX2	Q6ZRP7	698 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	MIER3	Q7Z3K6	550 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	HAUS6	Q7Z4H7	955 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	ZER1	Q7Z7L7	766 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	CLYBL	Q8N0X4	340 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	AFAP1	Q8N556	730 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	ZCCHC9	Q8N567	271 aa	Known RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	LINC01465	Q8N7H1	131 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	DENND6B	Q8NEG7	585 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	ABHD11	Q8NFV4	315 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	OR14L1P	Q8NHC6	308 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	RASSF8	Q8NHQ8	419 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	C9orf43	Q8TAL5	461 aa	Predicted RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	TRPC4AP	Q8TEL6	797 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	PRCC	Q92733	491 aa	Predicted RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	DNASE1L2	Q92874	299 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	MIB2	Q96AX9	1013 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	SPACA9	Q96E40	222 aa	Predicted RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	RRNAD1	Q96FB5	475 aa	Known RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	FBXL20	Q96IG2	436 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	HARBI1	Q96MB7	349 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	ABHD6	Q9BV23	337 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	ZNF350	Q9GZX5	532 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	POLE3	Q9NRF9	147 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	PARPBP	Q9NWS1	579 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	COMMD8	Q9NX08	183 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	CGN	Q9P2M7	1197 aa	Known RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	HEY2	Q9UBP5	337 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	DNAJB4	Q9UDY4	337 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	TSPYL4	Q9UJ04	414 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	HACL1	Q9UJ83	578 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	FBXO4	Q9UKT5	387 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	ITGA11	Q9UKX5	1188 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	MAP3K2	Q9Y2U5	619 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	LSM4	Q9Y4Z0	139 aa	Known RBP	4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	SPATA31A5	Q5VU36	1347 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	SPATA31A6	Q5VVP1	1343 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	SPATA31A7	Q8IWB4	1347 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	SYNRG	Q9UMZ2	1314 aa		4.94	□□□□□ -1.62
LSM5-205	ENST00000409952	GAGE12B	A1L429	117 aa		4.93	□□□□□ -1.62
LSM5-205	ENST00000409952	GAGE12H	A6NDE8	117 aa		4.93	□□□□□ -1.62
LSM5-205	ENST00000409952	AHRR	A9YTQ3	701 aa		4.93	□□□□□ -1.62
LSM5-205	ENST00000409952	NPIPB8	E9PQR5	432 aa		4.93	□□□□□ -1.62
LSM5-205	ENST00000409952	EIF3D	O15371	548 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
LSM5-205	ENST00000409952	MOSPD3	O75425	235 aa		4.93	□□□□□ -1.62
LSM5-205	ENST00000409952	APBB3	O95704	486 aa		4.93	□□□□□ -1.62
LSM5-205	ENST00000409952	SLPI	P03973	132 aa		4.93	□□□□□ -1.62
LSM5-205	ENST00000409952	ENO1	P06733	434 aa	Known RBP	4.93	□□□□□ -1.62
LSM5-205	ENST00000409952	VPREB1	P12018	145 aa		4.93	□□□□□ -1.62
LSM5-205	ENST00000409952	KRT13	P13646	458 aa		4.93	□□□□□ -1.62
LSM5-205	ENST00000409952	YWHAQ	P27348	245 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms