RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 NLRP14Q86W24 1093 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 SFTPA2Q8IWL1 248 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 RCOR2Q8IZ40 523 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 PCDH19Q8TAB3 1148 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 CPEB1Q9BZB8 566 aaKnown RBP12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 SLC13A1Q9BZW2 595 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 ROPN1BQ9BZX4 212 aaPredicted RBP12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 ROPN1Q9HAT0 212 aaPredicted RBP12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 ASIC3Q9UHC3 531 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 COQ6Q9Y2Z9 468 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 NEU2Q9Y3R4 380 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 CHD5Q8TDI0 1954 aa12.76□□□□□ -0.37
CHRNA1-205ENST00000409542 LRRK1Q38SD2 2015 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 D6RAR5 112 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 RPLP0P05388 317 aaKnown RBP12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 INHBCP55103 352 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 PPARDQ03181 441 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 SNX1Q13596 522 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 SLC29A2Q14542 456 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 TBR1Q16650 682 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 KCTD19Q17RG1 926 aaPredicted RBP12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 SLC25A52Q3SY17 297 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 TNFAIP8L3Q5GJ75 292 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 PPP1R15BQ5SWA1 713 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 DRICH1Q6PGQ1 229 aaPredicted RBP12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 MACC1Q6ZN28 852 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 MICALCLQ6ZW33 695 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 TMPRSS9Q7Z410 1059 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 FAM131BQ86XD5 332 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 ZFAND4Q86XD8 727 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 XYLT1Q86Y38 959 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 LURAP1LQ8IV03 231 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 CCDC50Q8IVM0 306 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 NIPA2Q8N8Q9 360 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 WDR48Q8TAF3 677 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 ZNF473Q8WTR7 871 aaKnown RBP12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 HTR3CQ8WXA8 447 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 ARHGEF2Q92974 986 aaKnown RBP12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 RAB7BQ96AH8 199 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 TBATAQ96M53 351 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 CFAP57Q96MR6 1250 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 GFM1Q96RP9 751 aaKnown RBP12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 EPAS1Q99814 870 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 ZYG11BQ9C0D3 744 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 SYNCQ9H7C4 482 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 RRN3Q9NYV6 651 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 PISDQ9UG56 409 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 ACSL6Q9UKU0 697 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 UNC13CQ8NB66 2214 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 TLN1Q9Y490 2541 aaKnown RBP12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 DOPEY2Q9Y3R5 2298 aa12.75□□□□□ -0.37
CHRNA1-205ENST00000409542 LRP4O75096 1905 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 TP73O15350 636 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 RGS16O15492 202 aaPredicted RBP12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 GSCP56915 257 aaPredicted RBP12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 YPEL5P62699 121 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 PIGHQ14442 188 aaPredicted RBP12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 CLCA4Q14CN2 919 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 IRF4Q15306 451 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 ALG11Q2TAA5 492 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 MYLK3Q32MK0 819 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 ATG14Q6ZNE5 492 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 CEP128Q6ZU80 1094 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 HID1Q8IV36 788 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 PLPP6Q8IY26 295 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 ARL10Q8N8L6 244 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 CCDC89Q8N998 374 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 CCHCR1Q8TD31 782 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 ATG4AQ8WYN0 398 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 FUBP1Q96AE4 644 aaKnown RBP12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 ISG20Q96AZ6 181 aaKnown RBP12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 HAPLN3Q96S86 360 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 CCT8L2Q96SF2 557 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 ARHGAP9Q9BRR9 750 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 WRAP53Q9BUR4 548 aaKnown RBP12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 LRRN3Q9H3W5 708 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 LRRC4CQ9HCJ2 640 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 DDX56Q9NY93 547 aaKnown RBP12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 FOXJ2Q9P0K8 574 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 STAP1Q9ULZ2 295 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 R3HDM2Q9Y2K5 976 aaKnown RBP12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 LOXL2Q9Y4K0 774 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 PCDHGA4Q9Y5G9 962 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 FAM169AQ9Y6X4 670 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 RELNP78509 3460 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 FLNCQ14315 2725 aa12.74□□□□□ -0.37
CHRNA1-205ENST00000409542 PRAMEF33A0A0G2JMD5 474 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 GMNCA6NCL1 334 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 C5orf60A6NFR6 353 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 FAM72CH0Y354 149 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 PRAMEF10O60809 474 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 TM7SF2O76062 418 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 F9P00740 461 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 ITGB2P05107 769 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 LIPCP11150 499 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 TIMP2P16035 220 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 MMP13P45452 471 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 GABRB2P47870 512 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 HK3P52790 923 aa12.73□□□□□ -0.37
CHRNA1-205ENST00000409542 FAM102AQ5T9C2 384 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms