RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 SRCP12931 536 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 SNRPD1P62314 119 aaKnown RBP20.61■□□□□ 0.89
USP39-203ENST00000409470 XIAPP98170 497 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 UBE3AQ05086 875 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 SLC5A9Q2M3M2 681 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 RAB44Q7Z6P3 723 aaPredicted RBP20.61■□□□□ 0.89
USP39-203ENST00000409470 CUZD1Q86UP6 607 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 RHEBL1Q8TAI7 183 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.61■□□□□ 0.89
USP39-203ENST00000409470 LMLNQ96KR4 655 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 BBS2Q9BXC9 721 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 DERL2Q9GZP9 239 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 C1orf21Q9H246 121 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 GRM6O15303 877 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 PENKP01210 267 aaPredicted RBP20.6■□□□□ 0.89
USP39-203ENST00000409470 JUNP05412 331 aaKnown RBP20.6■□□□□ 0.89
USP39-203ENST00000409470 SYN1P17600 705 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 SP100P23497 879 aaPredicted RBP20.6■□□□□ 0.89
USP39-203ENST00000409470 PTGER3P43115 390 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 NFKB2Q00653 900 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 SULT2A1Q06520 285 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 FUT11Q495W5 492 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 SETMARQ53H47 684 aaPredicted RBP20.6■□□□□ 0.89
USP39-203ENST00000409470 ZNF678Q5SXM1 525 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 SPRED2Q7Z698 418 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 UBE2Q1Q7Z7E8 422 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 PTGR2Q8N8N7 351 aaPredicted RBP20.6■□□□□ 0.89
USP39-203ENST00000409470 L3HYPDHQ96EM0 354 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 FAR2Q96K12 515 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 CCDC28BQ9BUN5 200 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 GSTO2Q9H4Y5 243 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 TRMT6Q9UJA5 497 aaKnown RBP20.6■□□□□ 0.89
USP39-203ENST00000409470 SLC25A13Q9UJS0 675 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 G3BP2Q9UN86 482 aaKnown RBP20.6■□□□□ 0.89
USP39-203ENST00000409470 OAS3Q9Y6K5 1087 aaKnown RBP20.6■□□□□ 0.89
USP39-203ENST00000409470 UBXN8O00124 270 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 GPR39O43194 453 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 XYLBO75191 536 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 NIPSNAP2O75323 286 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 BMP1P13497 986 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 HERVK_113P63132 956 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 NTHL1P78549 312 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 KLF10Q13118 480 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 ACCSLQ4AC99 568 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 CTSL3PQ5NE16 218 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 FAM151BQ6UXP7 276 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 STK40Q8N2I9 435 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 NKAPQ8N5F7 415 aaKnown RBP20.6■□□□□ 0.89
USP39-203ENST00000409470 DNAJC5GQ8N7S2 189 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 STON2Q8WXE9 905 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 TRMOQ9BU70 441 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 ERVK-6Q9BXR3 956 aa20.6■□□□□ 0.89
USP39-203ENST00000409470 LOC100653049A0A140TA62 436 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 E5RI56 91 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 KRT34O76011 436 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 CHRM3P20309 590 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 HNF1BP35680 557 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 ATP6V0D1P61421 351 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 NAA25Q14CX7 972 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 E2F5Q15329 346 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 ZNF697Q5TEC3 545 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 SIDT2Q8NBJ9 832 aaKnown RBP20.59■□□□□ 0.89
USP39-203ENST00000409470 STAG3L4Q8TBR4 150 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 IRF7Q92985 503 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 KIAA1191Q96A73 305 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 THTPAQ9BU02 230 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 GALPQ9UBC7 116 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 RNF112Q9ULX5 631 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 HS3ST2Q9Y278 367 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 L3MBTL1Q9Y468 752 aa20.59■□□□□ 0.89
USP39-203ENST00000409470 MAGEC1O60732 1142 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 KERAO60938 352 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 ENTPD5O75356 428 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 SKAP2O75563 359 aaPredicted RBP20.58■□□□□ 0.89
USP39-203ENST00000409470 GFAPP14136 432 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 GM2AP17900 193 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 HOXA9P31269 272 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 GALNT1Q10472 559 aaPredicted RBP20.58■□□□□ 0.89
USP39-203ENST00000409470 PFKFB4Q16877 469 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 UNC50Q53HI1 259 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 ASTLQ6HA08 431 aaPredicted RBP20.58■□□□□ 0.89
USP39-203ENST00000409470 C22orf39Q6P5X5 142 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 LEMD2Q8NC56 503 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 FAM161BQ96MY7 647 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 ATOH8Q96SQ7 321 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 PLA2G4CQ9UP65 541 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 COMMD10Q9Y6G5 202 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.58■□□□□ 0.89
USP39-203ENST00000409470 MYOFQ9NZM1 2061 aa20.58■□□□□ 0.89
USP39-203ENST00000409470 CXorf51AA0A1B0GTR3 108 aa20.58■□□□□ 0.88
USP39-203ENST00000409470 SUPT3HB4E1H0 165 aa20.58■□□□□ 0.88
USP39-203ENST00000409470 CLASP2O75122 1294 aaKnown RBP20.58■□□□□ 0.88
USP39-203ENST00000409470 SUPT3HO75486 399 aa20.58■□□□□ 0.88
USP39-203ENST00000409470 CLDN7O95471 211 aa20.58■□□□□ 0.88
USP39-203ENST00000409470 PRAMEF1O95521 474 aa20.58■□□□□ 0.88
USP39-203ENST00000409470 ESR1P03372 595 aa20.58■□□□□ 0.88
USP39-203ENST00000409470 HNRNPA1P09651 372 aaKnown RBP eCLIP20.58■□□□□ 0.88
USP39-203ENST00000409470 EZRP15311 586 aaKnown RBP20.58■□□□□ 0.88
USP39-203ENST00000409470 TSPAN8P19075 237 aa20.58■□□□□ 0.88
USP39-203ENST00000409470 PRDX6P30041 224 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms