RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 CSNK1G3Q9Y6M4 447 aa19.74■□□□□ 0.75
PDLIM2-207ENST00000409417 E7EVH7 732 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 GIPC1O14908 333 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 SCAMP1O15126 338 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 FANCGO15287 622 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 TAF1AQ15573 450 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 TRIP6Q15654 476 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 PRRT3Q5FWE3 981 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 PPM1JQ5JR12 505 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 TTC27Q6P3X3 843 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 OR1E3Q8WZA6 343 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 COX14Q96I36 57 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 SPATA16Q9BXB7 569 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 FRMD8Q9BZ67 464 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 BPIFA1Q9NP55 256 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 SPASTQ9UBP0 616 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 PKP3Q9Y446 797 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 C2orf81A6NN90 581 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 FADS2P1A8MWK0 482 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 AQP9O43315 295 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 SUN1O94901 812 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 CEACAM5P06731 702 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 APRTP07741 180 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 COILP38432 576 aaPredicted RBP19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 ALS2CLQ60I27 953 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 KCTD16Q68DU8 428 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 PDPK2PQ6A1A2 396 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 NYAP1Q6ZVC0 841 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 RD3Q7Z3Z2 195 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 CREG2Q8IUH2 290 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 TRAM1L1Q8N609 369 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 EID2Q8N6I1 236 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 DTX3LQ8TDB6 740 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 LMX1AQ8TE12 382 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 PDXPQ96GD0 296 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 LRRC61Q9BV99 259 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 IL26Q9NPH9 171 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 CNOT6Q9ULM6 557 aaKnown RBP19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 SLC17A4Q9Y2C5 497 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 ARL5AQ9Y689 179 aa19.73■□□□□ 0.75
PDLIM2-207ENST00000409417 TDRD6O60522 2096 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 PRSS38A1L453 326 aa19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 STX7O15400 261 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 PHF2O75151 1096 aa19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 CRTAMO95727 393 aa19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 TNFP01375 233 aa19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 LPOP22079 712 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 LMAN1P49257 510 aa19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 FNTAP49354 379 aa19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 ETF1P62495 437 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 PDE1BQ01064 536 aa19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 CCDC137Q6PK04 289 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 GLRX5Q86SX6 157 aa19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 FSTL5Q8N475 847 aaPredicted RBP19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 OR4C6Q8NH72 309 aa19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 C19orf43Q9BQ61 176 aa19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 CYP4F12Q9HCS2 524 aa19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 MRPL40Q9NQ50 206 aaKnown RBP19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 NLGN3Q9NZ94 848 aa19.72■□□□□ 0.75
PDLIM2-207ENST00000409417 NCOR2Q9Y618 2525 aa19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 GOLGA4Q13439 2230 aaKnown RBP19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 LMO7DNF2Z398 122 aa19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 TRIM38O00635 465 aa19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 INPP4BO15327 924 aa19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 BUD23O43709 281 aaKnown RBP19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 GIMD1P0DJR0 217 aa19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 SIM1P81133 766 aaPredicted RBP19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 ELOCQ15369 112 aa19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 ERMP1Q7Z2K6 904 aa19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 SDR16C5Q8N3Y7 309 aa19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 SCARF2Q96GP6 870 aaPredicted RBP19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 DUSP23Q9BVJ7 150 aa19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 EIF2B3Q9NR50 452 aaKnown RBP19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 FTSJ1Q9UET6 329 aa19.71■□□□□ 0.75
PDLIM2-207ENST00000409417 TPP1O14773 563 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 FFAR2O15552 330 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 TNFSF14O43557 240 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 FUCA1P04066 466 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 CTSEP14091 401 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 TPH1P17752 444 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 KCNA4P22459 653 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 SPAM1P38567 509 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 POLD2P49005 469 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 CDH17Q12864 832 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 HS1BP3Q53T59 392 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 TRIM74Q86UV6 250 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 OR52K1Q8NGK4 314 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 CAPZA3Q96KX2 299 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 CLPBQ9H078 707 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 VPS18Q9P253 973 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 RNF14Q9UBS8 474 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 MOSPD1Q9UJG1 213 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 TMEM98Q9Y2Y6 226 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 KCTD3Q9Y597 815 aa19.7■□□□□ 0.74
PDLIM2-207ENST00000409417 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 SPAARA0A1B0GVQ0 90 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 LDB2O43679 373 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 SIGLEC6O43699 453 aa19.69■□□□□ 0.74
PDLIM2-207ENST00000409417 KRT14P02533 472 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms