RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 RENBPP51606 427 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 ZNF143P52747 638 aaPredicted RBP16.55■□□□□ 0.24
CHMP3-203ENST00000409225 LRP8Q14114 963 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 RFTN1Q14699 578 aaPredicted RBP16.55■□□□□ 0.24
CHMP3-203ENST00000409225 EIF2S3LQ2VIR3 472 aaKnown RBP16.55■□□□□ 0.24
CHMP3-203ENST00000409225 ADAMTSL4Q6UY14 1074 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 MAMDC2Q7Z304 686 aaPredicted RBP16.55■□□□□ 0.24
CHMP3-203ENST00000409225 ARHGAP12Q8IWW6 846 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 ELMO2Q96JJ3 720 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 TUBGCP2Q9BSJ2 902 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 TBC1D10AQ9BXI6 508 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 TRIM55Q9BYV6 548 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 SARS2Q9NP81 518 aaKnown RBP16.55■□□□□ 0.24
CHMP3-203ENST00000409225 KIAA1468Q9P260 1216 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 KCND3Q9UK17 655 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 PRKAB1Q9Y478 270 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 MAP4K5Q9Y4K4 846 aa16.55■□□□□ 0.24
CHMP3-203ENST00000409225 SIGLEC16A6NMB1 481 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 PSMD11O00231 422 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 EEF2KO00418 725 aaKnown RBP16.54■□□□□ 0.24
CHMP3-203ENST00000409225 SOCS5O75159 536 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 CREG1O75629 220 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 ASMTLO95671 621 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 NFKBIAP25963 317 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 HTR7P34969 479 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 EPHA4P54764 986 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 AIF1P55008 147 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 GFERP55789 205 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 GSCP56915 257 aaPredicted RBP16.54■□□□□ 0.24
CHMP3-203ENST00000409225 IL10RBQ08334 325 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 LBRQ14739 615 aaKnown RBP16.54■□□□□ 0.24
CHMP3-203ENST00000409225 TECPR1Q7Z6L1 1165 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 SLC9B2Q86UD5 537 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 RASGRP3Q8IV61 690 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 LZTR1Q8N653 840 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 C3orf20Q8ND61 904 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 SH3KBP1Q96B97 665 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 AP2M1Q96CW1 435 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 MCEEQ96PE7 176 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 PSKH2Q96QS6 385 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 PCDHB18PQ96TA0 734 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 ABCG8Q9H221 673 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 CNOT8Q9UFF9 292 aaKnown RBP16.54■□□□□ 0.24
CHMP3-203ENST00000409225 TBC1D29Q9UFV1 150 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 ZNHIT2Q9UHR6 403 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 PHTF1Q9UMS5 762 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 SRPK3Q9UPE1 567 aa16.54■□□□□ 0.24
CHMP3-203ENST00000409225 PCYT1BQ9Y5K3 369 aaPredicted RBP16.54■□□□□ 0.24
CHMP3-203ENST00000409225 SHANK1Q9Y566 2161 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 ZNF106Q9H2Y7 1883 aaKnown RBP16.53■□□□□ 0.24
CHMP3-203ENST00000409225 A0A1W2PQ67 120 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 ANKRD62A6NC57 917 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 DAPK3O43293 454 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 SNX2O60749 519 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 NDUFA10O95299 355 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 CLDN1O95832 211 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 CALB1P05937 261 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 ANKRD34CP0C6C1 535 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 UNGP13051 313 aaPredicted RBP16.53■□□□□ 0.24
CHMP3-203ENST00000409225 CTPS1P17812 591 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 CASP14P31944 242 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 SEPHS1P49903 392 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 PGDP52209 483 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 SH3BP2P78314 561 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 DPTQ07507 201 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 SLC10A7Q0GE19 358 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 TRAF2Q12933 501 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 MRPL49Q13405 166 aaKnown RBP16.53■□□□□ 0.24
CHMP3-203ENST00000409225 SEMA5AQ13591 1074 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 DNASE1L3Q13609 305 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 ZNF235Q14590 738 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 CA9Q16790 459 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 PRR30Q53SZ7 412 aaPredicted RBP16.53■□□□□ 0.24
CHMP3-203ENST00000409225 TMCO4Q5TGY1 634 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 DNAJC24Q6P3W2 148 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 IYDQ6PHW0 289 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 TRIM72Q6ZMU5 477 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 CHST15Q7LFX5 561 aaPredicted RBP16.53■□□□□ 0.24
CHMP3-203ENST00000409225 LYSMD3Q7Z3D4 306 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 PLXDC1Q8IUK5 500 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 APLFQ8IW19 511 aaPredicted RBP16.53■□□□□ 0.24
CHMP3-203ENST00000409225 NPWQ8N729 165 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 SPOCK2Q92563 424 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 SCAMP4Q969E2 229 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 OR6C1Q96RD1 312 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 VPS16Q9H269 839 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 DHX35Q9H5Z1 703 aaKnown RBP16.53■□□□□ 0.24
CHMP3-203ENST00000409225 IGSF5Q9NSI5 407 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 LNPEPQ9UIQ6 1025 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 AP4E1Q9UPM8 1137 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 KCNK6Q9Y257 313 aa16.53■□□□□ 0.24
CHMP3-203ENST00000409225 MN1Q10571 1320 aaPredicted RBP16.52■□□□□ 0.24
CHMP3-203ENST00000409225 A6NCN8 305 aa16.52■□□□□ 0.24
CHMP3-203ENST00000409225 SORBS2O94875 1100 aaKnown RBP16.52■□□□□ 0.24
CHMP3-203ENST00000409225 ERCC2P18074 760 aa16.52■□□□□ 0.24
CHMP3-203ENST00000409225 RPL7AP62424 266 aaKnown RBP16.52■□□□□ 0.24
CHMP3-203ENST00000409225 CHAF1BQ13112 559 aa16.52■□□□□ 0.24
CHMP3-203ENST00000409225 TP53INP2Q8IXH6 220 aa16.52■□□□□ 0.24
CHMP3-203ENST00000409225 PRR7Q8TB68 274 aa16.52■□□□□ 0.24
CHMP3-203ENST00000409225 C9orf72Q96LT7 481 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms