RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 TMPRSS7Q7RTY8 843 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 TAF8Q7Z7C8 310 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 TRIM74Q86UV6 250 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 GALNT15Q8N3T1 639 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 GPR26Q8NDV2 337 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 ATG4AQ8WYN0 398 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 GORASP1Q9BQQ3 440 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 TMEM121Q9BTD3 319 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 BOCQ9BWV1 1114 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 SPATA16Q9BXB7 569 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 CDH19Q9H159 772 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 TRABDQ9H4I3 376 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 GULP1Q9UBP9 304 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 SUFUQ9UMX1 484 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 GPR34Q9UPC5 381 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 SLC17A4Q9Y2C5 497 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 U3KQA8 63 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 ACACBO00763 2458 aa17.84■□□□□ 0.45
PDLIM2-206ENST00000409141 CPED1A4D0V7 1026 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 ASMTLO95671 621 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 FGF1P05230 155 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 GNPDA1P46926 289 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 NR0B2Q15466 257 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 SMAD1Q15797 465 aaKnown RBP17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 BLOC1S5Q8TDH9 187 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 CNTNAP3BQ96NU0 1288 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 PPP1R2P1Q96PQ5 205 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 TLR10Q9BXR5 811 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 FRMD8P1Q9BZ68 369 aaPredicted RBP17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 CNTNAP3Q9BZ76 1288 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 BPIFA1Q9NP55 256 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 HACD3Q9P035 362 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 SIRPGQ9P1W8 387 aa17.83■□□□□ 0.45
PDLIM2-206ENST00000409141 FADS2P1A8MWK0 482 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 BPIP17213 487 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 GDF10P55107 478 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 E2F1Q01094 437 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 PARP6Q2NL67 630 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 RANBP10Q6VN20 620 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 MARK2Q7KZI7 788 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 SLC35F3Q8IY50 421 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 CCL4L1Q8NHW4 92 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 PTCD2Q8WV60 388 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 C1orf54Q8WWF1 131 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 COX14Q96I36 57 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 APOL2Q9BQE5 337 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 CNOT6Q9ULM6 557 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 ZSCAN12O43309 604 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 LIASO43766 372 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 ATP1A1P05023 1023 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 IVLP07476 585 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 STIP1P31948 543 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 ADRA1AP35348 466 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 HMGCLP35914 325 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 DCDC1P59894 354 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 CCNI2Q6ZMN8 369 aaPredicted RBP17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 GLT6D1Q7Z4J2 308 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 TMPRSS12Q86WS5 348 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 FAM46DQ8NEK8 389 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 IFI44Q8TCB0 444 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 LRRC45Q96CN5 670 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 ZSCAN5AQ9BUG6 496 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 TRNAU1APQ9NX07 287 aaKnown RBP17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 PADI4Q9UM07 663 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 ZNF148Q9UQR1 794 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 GPSM3Q9Y4H4 160 aa17.82■□□□□ 0.44
PDLIM2-206ENST00000409141 EME2A4GXA9 379 aaPredicted RBP17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 FAM149AA5PLN7 773 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 GP1BAP07359 652 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 JUPP14923 745 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 ADCY8P40145 1251 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 CLDN6P56747 220 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 ILF3Q12906 894 aaKnown RBP eCLIP17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 OLIG2Q13516 323 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 SNX1Q13596 522 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 SPARCL1Q14515 664 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 ZNF569Q5MCW4 686 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 GUSBP11Q6P575 273 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 EFL1Q7Z2Z2 1120 aaKnown RBP17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 MARCH9Q86YJ5 346 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 TTC30BQ8N4P2 665 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 TRAM1L1Q8N609 369 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 ARL10Q8N8L6 244 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 GPBAR1Q8TDU6 330 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 SCARF2Q96GP6 870 aaPredicted RBP17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 GSDMCQ9BYG8 508 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 ABCG4Q9H172 646 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 KCNF1Q9H3M0 494 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 DPEP2Q9H4A9 486 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 NFKBIL1Q9UBC1 381 aaPredicted RBP17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 OAS3Q9Y6K5 1087 aaKnown RBP17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 LRP4O75096 1905 aa17.81■□□□□ 0.44
PDLIM2-206ENST00000409141 BUD23O43709 281 aaKnown RBP17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 CEP104O60308 925 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 SLC25A14O95258 325 aaPredicted RBP17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 METTL18O95568 372 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 FGGP02679 453 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 CXCR5P32302 372 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 CTBSQ01459 385 aa17.8■□□□□ 0.44
PDLIM2-206ENST00000409141 OASLQ15646 514 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms