RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 LRTM1Q9HBL6 345 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 THG1LQ9NWX6 298 aaKnown RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 SUCOQ9UBS9 1254 aaKnown RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 ZC3H13Q5T200 1668 aaKnown RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 KCNU1A8MYU2 1149 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 SLC22A1O15245 554 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 SLC5A3P53794 718 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 SLC18A1P54219 525 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 SIM2Q14190 667 aaPredicted RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 MFSD10Q14728 455 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 DLG2Q15700 870 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 ARL13AQ5H913 290 aaPredicted RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 ZDHHC20Q5W0Z9 365 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 DEF8Q6ZN54 512 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 KCTD8Q6ZWB6 473 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 SMIM5Q71RC9 77 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 OR4A15Q8NGL6 344 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 CDT1Q9H211 546 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 ZNF224Q9NZL3 707 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 GULP1Q9UBP9 304 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 DERAQ9Y315 318 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 TLL2Q9Y6L7 1015 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 CEP170BQ9Y4F5 1589 aaPredicted RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 ZW10O43264 779 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 ATP6V1G1O75348 118 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 PIAS1O75925 651 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 ACADMP11310 421 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 ACAP2Q15057 778 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 WSCD1Q658N2 575 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 CHST15Q7LFX5 561 aaPredicted RBP12.93□□□□□ -0.34
RNF43-201ENST00000407977 TWIST2Q8WVJ9 160 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 PCDHB18PQ96TA0 734 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 TMEM106CQ9BVX2 250 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 TAS2R7Q9NYW3 318 aa12.93□□□□□ -0.34
RNF43-201ENST00000407977 MSX2P35548 267 aaPredicted RBP12.92□□□□□ -0.34
RNF43-201ENST00000407977 AQP4P55087 323 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 POU5F1Q01860 360 aaKnown RBP12.92□□□□□ -0.34
RNF43-201ENST00000407977 HERC3Q15034 1050 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 TSC22D1Q15714 1073 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 AP5B1Q2VPB7 878 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 HECTD2Q5U5R9 776 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 PGBD2Q6P3X8 592 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 USP43Q70EL4 1123 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 COPS8Q99627 209 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 KCNN2Q9H2S1 579 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 EBF3Q9H4W6 596 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 C3orf14Q9HBI5 128 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 TAS2R1Q9NYW7 299 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 AP2A2O94973 939 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 RPLP0P05388 317 aaKnown RBP12.92□□□□□ -0.34
RNF43-201ENST00000407977 ABL2P42684 1182 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 CDKN2BP42772 138 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 DLG1Q12959 904 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 CSGALNACT1Q8TDX6 532 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 SLC16A10Q8TF71 515 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 TIFAQ96CG3 184 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 SEMA3GQ9NS98 782 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 DISP2A7MBM2 1401 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 KPNA3O00505 521 aaPredicted RBP12.92□□□□□ -0.34
RNF43-201ENST00000407977 SPATA31C1P0DKV0 1188 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 FECHP22830 423 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 TAS2R41P59536 307 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 LCP2Q13094 533 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 E2F2Q14209 437 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 HECTD3Q5T447 861 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 RAP1GAP2Q684P5 730 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 FBXL19Q6PCT2 694 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 BEND5Q7L4P6 421 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 ANKS1BQ7Z6G8 1248 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 BANPQ8N9N5 519 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 PHC3Q8NDX5 983 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 PPM1MQ96MI6 270 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 MAGEE1Q9HCI5 957 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 FKBP14Q9NWM8 211 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 SMPD4Q9NXE4 827 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 U3KQV3 271 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 OR14I1A6ND48 311 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 AQP12BA6NM10 295 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 TNFRSF11BO00300 401 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 SLC28A2O43868 658 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 ASLP04424 464 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 RLN1P04808 185 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 RPL9P32969 192 aaKnown RBP12.92□□□□□ -0.34
RNF43-201ENST00000407977 LLGL2Q6P1M3 1020 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 LAPTM4BQ86VI4 370 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 RIOX2Q8IUF8 465 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 AQP12AQ8IXF9 295 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 COLGALT2Q8IYK4 626 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 RFKQ969G6 155 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 RASSF1Q9NS23 344 aa12.92□□□□□ -0.34
RNF43-201ENST00000407977 RPP40O75818 363 aaKnown RBP12.91□□□□□ -0.34
RNF43-201ENST00000407977 TRBC1P01850 177 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 BUD31P41223 144 aaPredicted RBP12.91□□□□□ -0.34
RNF43-201ENST00000407977 NUMBP49757 651 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 AP1S2P56377 157 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 RNF44Q7L0R7 432 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 MRIQ9BWK5 157 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 NUSAP1Q9BXS6 441 aaKnown RBP12.91□□□□□ -0.34
RNF43-201ENST00000407977 TPK1Q9H3S4 243 aa12.91□□□□□ -0.34
RNF43-201ENST00000407977 UROSP10746 265 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms