RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 MMTAG2Q9BU76 263 aaKnown RBP4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 CCDC106Q9BWC9 280 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 NPFFR1Q9GZQ6 430 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 ALDH8A1Q9H2A2 487 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 MAGIXQ9H6Y5 334 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 GPR108Q9NPR9 543 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 PDGFCQ9NRA1 345 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 ZNHIT2Q9UHR6 403 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 ANAPC5Q9UJX4 755 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 PADI1Q9ULC6 663 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 PAM16Q9Y3D7 125 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 CLASP1Q7Z460 1538 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 KDM5DQ9BY66 1539 aa4.82□□□□□ -1.64
HMGB3P18-201ENST00000406327 CNTLNQ9NXG0 1405 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 LNP1A1A4G5 178 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 MANSC4A6NHS7 340 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 MAP2K7O14733 419 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 ZC3H11AO75152 810 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 CNOT3O75175 753 aaKnown RBP4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 LATS1O95835 1130 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 VPREB1P12018 145 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 GLULP15104 373 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 ACADLP28330 430 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 THPOP40225 353 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 GDF5P43026 501 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 TMPRSS3P57727 454 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 CXCL9Q07325 125 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 FHL2Q14192 279 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 INPP5JQ15735 1006 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 PNLIPRP3Q17RR3 467 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 C1QTNF12Q5T7M4 302 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 CST9LP1Q5W188 147 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 DHRS7BQ6IAN0 325 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 FBXO46Q6PJ61 603 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 ZNF782Q6ZMW2 699 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 HAPLN4Q86UW8 402 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 GALNT13Q8IUC8 556 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 MB21D2Q8IYB1 491 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 SCYL3Q8IZE3 742 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 GUF1Q8N442 669 aaKnown RBP4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 OR8K5Q8NH50 307 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 MPLKIPQ8TAP9 179 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 IGSF8Q969P0 613 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 VPS33AQ96AX1 596 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 GBP5Q96PP8 586 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 ACOX2Q99424 681 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 RTN4RQ9BZR6 473 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 MMP27Q9H306 513 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 HINT3Q9NQE9 182 aaKnown RBP4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 FLRT1Q9NZU1 646 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 DMRT1Q9Y5R6 373 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 STON1Q9Y6Q2 735 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 SAMD9LQ8IVG5 1584 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 ARHGAP5Q13017 1502 aa4.81□□□□□ -1.64
HMGB3P18-201ENST00000406327 LOC102723996A0A087X1L8 192 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 LRRC3CA6NJW4 275 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 PSMA7O14818 248 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 BCAR3O75815 825 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 IFNA2P01563 188 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 FYNP06241 537 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 MMP9P14780 707 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 GJA1P17302 382 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 CHRNB2P17787 502 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 METAP2P50579 478 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 RASSF2P50749 326 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 SREBF2Q12772 1141 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 GRSF1Q12849 480 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 BFSP1Q12934 665 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 IGSF11Q5DX21 431 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 ZNF628Q5EBL2 1059 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 EPHA10Q5JZY3 1008 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 COLEC12Q5KU26 742 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 LRIF1Q5T3J3 769 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 TMEM71Q6P5X7 295 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 IL27RAQ6UWB1 636 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 CNGA4Q8IV77 575 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 AFAP1Q8N556 730 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 PTPMT1Q8WUK0 201 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 TMEM174Q8WUU8 243 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 VMP1Q96GC9 406 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 DACH2Q96NX9 599 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 SORCS2Q96PQ0 1159 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 SPAG5Q96R06 1193 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 TRMOQ9BU70 441 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 RIOX1Q9H6W3 641 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 EPB41L5Q9HCM4 733 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 FZD3Q9NPG1 666 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 DDX4Q9NQI0 724 aaKnown RBP4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 DECR2Q9NUI1 292 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 IL17BQ9UHF5 180 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 RASAL2Q9UJF2 1139 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 OSGIN1Q9UJX0 560 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 PLAGL1Q9UM63 463 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 ZNF148Q9UQR1 794 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 ARHGEF12Q9NZN5 1544 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 CHD1O14646 1710 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 CDC42BPAQ5VT25 1732 aa4.8□□□□□ -1.64
HMGB3P18-201ENST00000406327 USP47Q96K76 1375 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms