RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 A0A0J9YYE9 177 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 KLHL33A6NCF5 533 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 SLC9A3R1O14745 358 aaPredicted RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 PER2O15055 1255 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 GYG2O15488 501 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 NPHS1O60500 1241 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 ZNF821O75541 412 aaPredicted RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 SKAP2O75563 359 aaPredicted RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 PIGNO95427 931 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 TRBC1P01850 177 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 CA3P07451 260 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 PRSS56P0CW18 603 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 PABPC1P11940 636 aaKnown RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 CTPS1P17812 591 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 PRKAA1Q13131 559 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 PDAP1Q13442 181 aaKnown RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 GPM6BQ13491 265 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 FUT11Q495W5 492 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 ZRANB3Q5FWF4 1079 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 CFAP157Q5JU67 520 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 DGKKQ5KSL6 1271 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 ZNF697Q5TEC3 545 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 LYSMD3Q7Z3D4 306 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 PIWIL4Q7Z3Z4 852 aaKnown RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 PIM3Q86V86 326 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 SLC22A9Q8IVM8 553 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 RYBPQ8N488 228 aaPredicted RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 ZNF781Q8N8C0 355 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 RPL10LQ96L21 214 aaKnown RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 TUBGCP5Q96RT8 1024 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 EBF4Q9BQW3 602 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 TNKS2Q9H2K2 1166 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 POMKQ9H5K3 350 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 SYTL2Q9HCH5 934 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 BPIFA1Q9NP55 256 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 PAPOLBQ9NRJ5 636 aaKnown RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 TAS2R13Q9NYV9 303 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 NCKIPSDQ9NZQ3 722 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 NUP210Q8TEM1 1887 aaPredicted RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 SLCO1B7G3V0H7 640 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 ZNF195O14628 629 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 SMIM24O75264 130 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 SRP72O76094 671 aaKnown RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 RHOBTB1O94844 696 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 PSMG1O95456 288 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 ALPIP09923 528 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 TYRP14679 529 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 TFEBP19484 476 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 SP100P23497 879 aaPredicted RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 FMO4P31512 558 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 CTSOP43234 321 aaPredicted RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 IDH3AP50213 366 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 RPL14P50914 215 aaKnown RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 TIAL1Q01085 375 aaKnown RBP eCLIP11.79□□□□□ -0.522e-6■■■■□ 22.9
SMS-202ENST00000404933 CACNG1Q06432 222 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 PEX6Q13608 980 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 ARL13AQ5H913 290 aaPredicted RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 TRIM68Q6AZZ1 485 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 C22orf39Q6P5X5 142 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 TMEM154Q6P9G4 183 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 TMEM207Q6UWW9 146 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 TTC7BQ86TV6 843 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 PCDH20Q8N6Y1 951 aaKnown RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 TXNDC5Q8NBS9 432 aaKnown RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 STMN2Q93045 179 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMS-202ENST00000404933 MCUR1Q96AQ8 359 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 ZNF707Q96C28 371 aaPredicted RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 SGF29Q96ES7 293 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 CNDP1Q96KN2 507 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 YIPF3Q9GZM5 350 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 LINC00597Q9H2U6 94 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 PIDD1Q9HB75 910 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 ARL8BQ9NVJ2 186 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 NMRK1Q9NWW6 199 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 MRPS23Q9Y3D9 190 aaKnown RBP11.79□□□□□ -0.52
SMS-202ENST00000404933 HCFC2Q9Y5Z7 792 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 COMMD10Q9Y6G5 202 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 SLC30A1Q9Y6M5 507 aa11.79□□□□□ -0.52
SMS-202ENST00000404933 GRXCR1A8MXD5 290 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 MAP3K7O43318 606 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 IPO13O94829 963 aaKnown RBP11.78□□□□□ -0.52
SMS-202ENST00000404933 PYGLP06737 847 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 CHRNGP07510 517 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 ZNF37AP17032 561 aaPredicted RBP11.78□□□□□ -0.52
SMS-202ENST00000404933 CEBPBP17676 345 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 PPARGP37231 505 aaPredicted RBP11.78□□□□□ -0.52
SMS-202ENST00000404933 STK19P49842 368 aaPredicted RBP11.78□□□□□ -0.52
SMS-202ENST00000404933 ERVK-21P61565 698 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 XIAPP98170 497 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 ECT2LQ008S8 904 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 RAD51Q06609 339 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 DYNC1I2Q13409 638 aaKnown RBP11.78□□□□□ -0.52
SMS-202ENST00000404933 TUBB3Q13509 450 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 PTPRRQ15256 657 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 MYLK3Q32MK0 819 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 KHDC1Q4VXA5 237 aaKnown RBP11.78□□□□□ -0.52
SMS-202ENST00000404933 LY6G5CQ5SRR4 150 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 C6orf163Q5TEZ5 329 aa11.78□□□□□ -0.52
SMS-202ENST00000404933 ASTLQ6HA08 431 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms