RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 FGF3P11487 239 aaPredicted RBP12.3□□□□□ -0.44
PRAME-204ENST00000403441 IL4RP24394 825 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 AK4P27144 223 aaPredicted RBP12.3□□□□□ -0.44
PRAME-204ENST00000403441 TEAD1P28347 426 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 ADCY8P40145 1251 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 ETV3P41162 512 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 PPM1FP49593 454 aaPredicted RBP12.3□□□□□ -0.44
PRAME-204ENST00000403441 LIMK2P53671 638 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 HADHBP55084 474 aaKnown RBP12.3□□□□□ -0.44
PRAME-204ENST00000403441 CTBSQ01459 385 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 SLC10A7Q0GE19 358 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 CLCA4Q14CN2 919 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 DOK6Q6PKX4 331 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 USP45Q70EL2 814 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 FAM129CQ86XR2 697 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 CPNE8Q86YQ8 564 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 NSMCE1Q8WV22 266 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 NKD1Q969G9 470 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 PANX2Q96RD6 677 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 NUDCD1Q96RS6 583 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 SLC12A9Q9BXP2 914 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 ASPSCR1Q9BZE9 553 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 DEF6Q9H4E7 631 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 PCDH18Q9HCL0 1135 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 KCNK4Q9NYG8 393 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 SLC17A4Q9Y2C5 497 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 SDK2Q58EX2 2172 aa12.3□□□□□ -0.44
PRAME-204ENST00000403441 NPIPB15A6NHN6 443 aaPredicted RBP12.29□□□□□ -0.44
PRAME-204ENST00000403441 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 THRAP10827 490 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 LIFP15018 202 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 CDC25BP30305 580 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 ARL4AP40617 200 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 ACTR1BP42025 376 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 ARHGAP25P42331 645 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 POLE2P56282 527 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 RAB15P59190 212 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 TAS2R40P59535 323 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 ACTR1AP61163 376 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 GPLD1P80108 840 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 TLE1Q04724 770 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 KCNAB2Q13303 367 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 SMTNL2Q2TAL5 461 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 RALGPS1Q5JS13 557 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 DCAF12Q5T6F0 453 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 NKAIN2Q5VXU1 208 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 TMCO3Q6UWJ1 677 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 Q6ZVL8 140 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 HSD11B1LQ7Z5J1 315 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 RHOT2Q8IXI1 618 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 CCDC170Q8IYT3 715 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 CACNA2D3Q8IZS8 1091 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 ATPAF2Q8N5M1 289 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 SLC35G2Q8TBE7 412 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 PATE1Q8WXA2 126 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 KIAA1143Q96AT1 154 aaPredicted RBP12.29□□□□□ -0.44
PRAME-204ENST00000403441 FAF2Q96CS3 445 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 AHCYL2Q96HN2 611 aaKnown RBP12.29□□□□□ -0.44
PRAME-204ENST00000403441 CSPG4P5Q96PW8 444 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 OR2M4Q96R27 311 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 NOD2Q9HC29 1040 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.29□□□□□ -0.44
PRAME-204ENST00000403441 SLC39A1Q9NY26 324 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 CTTNBP2NLQ9P2B4 639 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 TUBD1Q9UJT1 453 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 PHTF1Q9UMS5 762 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 B3GALT1Q9Y5Z6 326 aa12.29□□□□□ -0.44
PRAME-204ENST00000403441 IGHV1OR21-1A0A087WYE8 117 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 TTC24A2A3L6 582 aaPredicted RBP12.28□□□□□ -0.44
PRAME-204ENST00000403441 ZNF891A8MT65 544 aaPredicted RBP12.28□□□□□ -0.44
PRAME-204ENST00000403441 ZNF487B1APH4 448 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 B4E171 279 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 CAPN5O15484 640 aaPredicted RBP12.28□□□□□ -0.44
PRAME-204ENST00000403441 DUX1O43812 170 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 FUCA1P04066 466 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 LHCGRP22888 699 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 CSF2RBP32927 897 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 UGT1A3P35503 534 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 TSPAN7P41732 249 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 GPR1P46091 355 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 CCR10P46092 362 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 POLD2P49005 469 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 DPTQ07507 201 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 SQSTM1Q13501 440 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 LRP8Q14114 963 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 ARMC12Q5T9G4 340 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 ADAMTSL4Q6UY14 1074 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 VSIG1Q86XK7 387 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 NRSN1Q8IZ57 195 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 NAGSQ8N159 534 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 NDUFAF2Q8N183 169 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 OR10G6Q8NH81 332 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 PTCD2Q8WV60 388 aaKnown RBP12.28□□□□□ -0.44
PRAME-204ENST00000403441 PMEPA1Q969W9 287 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 SCRN2Q96FV2 425 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 NSMCE3Q96MG7 304 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 CATSPER2Q96P56 530 aa12.28□□□□□ -0.44
PRAME-204ENST00000403441 TEFMQ96QE5 360 aaKnown RBP12.28□□□□□ -0.44
PRAME-204ENST00000403441 MCCC1Q96RQ3 725 aaPredicted RBP12.28□□□□□ -0.44
PRAME-204ENST00000403441 MGME1Q9BQP7 344 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms