RNA–Protein interactions for RNA: ENST00000402458.1

SNU13-204, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 3 BASIC

Gene SNU13, Length 462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-204ENST00000402458 TLR4O00206 839 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 LRP3O75074 770 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 SYPP08247 313 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 RHOXF2BP0C7M4 288 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 HLTFQ14527 1009 aaKnown RBP eCLIP13.55□□□□□ -0.24
SNU13-204ENST00000402458 PTPRCAPQ14761 206 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 TRIM61Q5EBN2 209 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 FNBP1LQ5T0N5 605 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 SLC23A3Q6PIS1 610 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 FAM151BQ6UXP7 276 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 ADAMTSL4Q6UY14 1074 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 CEP128Q6ZU80 1094 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 HEATR4Q86WZ0 1026 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 CCNJLQ8IV13 435 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 OR13H1Q8NG92 308 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 DTX3LQ8TDB6 740 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 IFT81Q8WYA0 676 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 SEC14L1Q92503 715 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 HIC2Q96JB3 615 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 RHOXF2Q9BQY4 288 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 KIFC1Q9BW19 673 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 FOXP3Q9BZS1 431 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 ZDHHC5Q9C0B5 715 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 IL26Q9NPH9 171 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 MTRF1LQ9UGC7 380 aaKnown RBP13.55□□□□□ -0.24
SNU13-204ENST00000402458 DMGDHQ9UI17 866 aaKnown RBP13.55□□□□□ -0.24
SNU13-204ENST00000402458 FKBPLQ9UIM3 349 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 OR1A2Q9Y585 309 aa13.55□□□□□ -0.24
SNU13-204ENST00000402458 ZNF106Q9H2Y7 1883 aaKnown RBP13.55□□□□□ -0.24
SNU13-204ENST00000402458 PI4KAP42356 2102 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 H7C0S8 307 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 K7ESM1 405 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 EIF3HO15372 352 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNU13-204ENST00000402458 SRP72O76094 671 aaKnown RBP13.54□□□□□ -0.24
SNU13-204ENST00000402458 PRAMEF1O95521 474 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 POLBP06746 335 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 HOXC4P09017 264 aaPredicted RBP13.54□□□□□ -0.24
SNU13-204ENST00000402458 ITGALP20701 1170 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 TRIM23P36406 574 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 KIAA1024LP59773 190 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 PFN3P60673 137 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 DHX9Q08211 1270 aaKnown RBP13.54□□□□□ -0.24
SNU13-204ENST00000402458 CUL1Q13616 776 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 PDE1CQ14123 709 aaPredicted RBP13.54□□□□□ -0.24
SNU13-204ENST00000402458 NFATC4Q14934 902 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 CHRNA6Q15825 494 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 AFTPHQ6ULP2 937 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 IL27RAQ6UWB1 636 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 PHYKPLQ8IUZ5 450 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 MPP5Q8N3R9 675 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 GPR161Q8N6U8 529 aaKnown RBP13.54□□□□□ -0.24
SNU13-204ENST00000402458 OR6P1Q8NGX9 317 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 GDAP1Q8TB36 358 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 FBXO25Q8TCJ0 367 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 RUBCNQ92622 972 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNU13-204ENST00000402458 ULK4Q96C45 1275 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 CDKN2AIPNLQ96HQ2 116 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 TTC1Q99614 292 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 TEX101Q9BY14 249 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 TSPYL1Q9H0U9 437 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 GDF3Q9NR23 364 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 RAPGEFL1Q9UHV5 662 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 ANKRD6Q9Y2G4 727 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 SLCO1B1Q9Y6L6 691 aa13.54□□□□□ -0.24
SNU13-204ENST00000402458 MUC6Q6W4X9 2439 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 FAM237BA0A1B0GVD1 139 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 A0A1B0GVT2 93 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 INPP4BO15327 924 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 FOXD2O60548 495 aaPredicted RBP13.53□□□□□ -0.24
SNU13-204ENST00000402458 USP1O94782 785 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 SLC25A14O95258 325 aaPredicted RBP13.53□□□□□ -0.24
SNU13-204ENST00000402458 TTC4O95801 387 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 WNT1P04628 370 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 MYCLP1P12525 358 aaPredicted RBP13.53□□□□□ -0.24
SNU13-204ENST00000402458 PGAM1P18669 254 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 PSMA3P25788 255 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 NMBRP28336 390 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 MC4RP32245 332 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 ATXN3P54252 364 aaPredicted RBP13.53□□□□□ -0.24
SNU13-204ENST00000402458 NXPH1P58417 271 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 CDK3Q00526 305 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 CACNG1Q06432 222 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 SPEM2Q0P670 501 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 PDIA2Q13087 525 aaKnown RBP13.53□□□□□ -0.24
SNU13-204ENST00000402458 CCDC6Q16204 474 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 GPR33Q49SQ1 333 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 ZRANB3Q5FWF4 1079 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 PLA2G2CQ5R387 149 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 ENPP7Q6UWV6 458 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 LAYNQ6UX15 382 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 MACC1Q6ZN28 852 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 SNX20Q7Z614 316 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 OXR1Q8N573 874 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 LRRN4CLQ8ND94 238 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 OR13J1Q8NGT2 312 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 BTN2A2Q8WVV5 523 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 GLYATL1Q969I3 302 aa13.53□□□□□ -0.24
SNU13-204ENST00000402458 HDAC10Q969S8 669 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms