RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 PTCD2Q8WV60 388 aaKnown RBP17.31■□□□□ 0.36
HDAC11-202ENST00000402259 FUBP1Q96AE4 644 aaKnown RBP17.31■□□□□ 0.36
HDAC11-202ENST00000402259 SNF8Q96H20 258 aa17.31■□□□□ 0.36
HDAC11-202ENST00000402259 ERP44Q9BS26 406 aa17.31■□□□□ 0.36
HDAC11-202ENST00000402259 TRIM51Q9BSJ1 452 aa17.31■□□□□ 0.36
HDAC11-202ENST00000402259 EDEM2Q9BV94 578 aa17.31■□□□□ 0.36
HDAC11-202ENST00000402259 IL26Q9NPH9 171 aa17.31■□□□□ 0.36
HDAC11-202ENST00000402259 DNAAF2Q9NVR5 837 aaKnown RBP17.31■□□□□ 0.36
HDAC11-202ENST00000402259 NLE1Q9NVX2 485 aaPredicted RBP17.31■□□□□ 0.36
HDAC11-202ENST00000402259 PIH1D1Q9NWS0 290 aaKnown RBP17.31■□□□□ 0.36
HDAC11-202ENST00000402259 APPL1Q9UKG1 709 aa17.31■□□□□ 0.36
HDAC11-202ENST00000402259 USP34Q70CQ2 3546 aa17.31■□□□□ 0.36
HDAC11-202ENST00000402259 CTAGE15A4D2H0 777 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 EFCAB8A8MWE9 144 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 TNFRSF10CO14798 259 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 CTAGE8P0CG41 777 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 DEKP35659 375 aaKnown RBP17.3■□□□□ 0.36
HDAC11-202ENST00000402259 MAGEA3P43357 314 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 LIMK1P53667 647 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 ATXN3P54252 364 aaPredicted RBP17.3■□□□□ 0.36
HDAC11-202ENST00000402259 CDK3Q00526 305 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 SEPT6Q14141 434 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 FZD2Q14332 565 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 KCTD19Q17RG1 926 aaPredicted RBP17.3■□□□□ 0.36
HDAC11-202ENST00000402259 SKIDA1Q1XH10 827 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 HLA-BQ31612 363 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 AASDHQ4L235 1098 aaPredicted RBP17.3■□□□□ 0.36
HDAC11-202ENST00000402259 PCID2Q5JVF3 399 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 CTAGE6Q86UF2 777 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 CAND1Q86VP6 1230 aaKnown RBP17.3■□□□□ 0.36
HDAC11-202ENST00000402259 PARGQ86W56 976 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 CTAGE4Q8IX94 777 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 PPHLN1Q8NEY8 458 aaKnown RBP17.3■□□□□ 0.36
HDAC11-202ENST00000402259 COX14Q96I36 57 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 HIC2Q96JB3 615 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 WDR92Q96MX6 357 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 SERPINB12Q96P63 405 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 VPS35Q96QK1 796 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 AGAP2Q99490 1192 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 ELF4Q99607 663 aaPredicted RBP17.3■□□□□ 0.36
HDAC11-202ENST00000402259 SPATA16Q9BXB7 569 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 RAB17Q9H0T7 212 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 MRM3Q9HC36 420 aaKnown RBP17.3■□□□□ 0.36
HDAC11-202ENST00000402259 BPIFA1Q9NP55 256 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 TCAF1Q9Y4C2 921 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 OR1A2Q9Y585 309 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 KCTD3Q9Y597 815 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 CABIN1Q9Y6J0 2220 aa17.3■□□□□ 0.36
HDAC11-202ENST00000402259 LRP4O75096 1905 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 GLYATL1P3A0A0U1RQE8 302 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 FADS2P1A8MWK0 482 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 BUD23O43709 281 aaKnown RBP17.29■□□□□ 0.36
HDAC11-202ENST00000402259 SEC31AO94979 1220 aaKnown RBP17.29■□□□□ 0.36
HDAC11-202ENST00000402259 ARRB1P49407 418 aaPredicted RBP17.29■□□□□ 0.36
HDAC11-202ENST00000402259 SESN2P58004 480 aaPredicted RBP17.29■□□□□ 0.36
HDAC11-202ENST00000402259 ACVR1Q04771 509 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 ITGA9Q13797 1035 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 TPRG1LQ5T0D9 272 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 ALS2CLQ60I27 953 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 HIBCHQ6NVY1 386 aaPredicted RBP17.29■□□□□ 0.36
HDAC11-202ENST00000402259 C8orf74Q6P047 294 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 KDM7AQ6ZMT4 941 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 MINDY1Q8N5J2 469 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 OR13C4Q8NGS5 318 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 TBATAQ96M53 351 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 GAREM1Q9H706 876 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 TMEM9BQ9NQ34 198 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 FSCN3Q9NQT6 498 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 SMOXQ9NWM0 555 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 WHRNQ9P202 907 aa17.29■□□□□ 0.36
HDAC11-202ENST00000402259 CNOT6Q9ULM6 557 aaKnown RBP17.29■□□□□ 0.36
HDAC11-202ENST00000402259 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.29■□□□□ 0.36
HDAC11-202ENST00000402259 A0A1B0GTQ1 180 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 GAPDHSO14556 408 aaPredicted RBP17.28■□□□□ 0.36
HDAC11-202ENST00000402259 CDX4O14627 284 aaPredicted RBP17.28■□□□□ 0.36
HDAC11-202ENST00000402259 CSF2P04141 144 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 NME1P15531 152 aaKnown RBP17.28■□□□□ 0.36
HDAC11-202ENST00000402259 TERF1P54274 439 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 ARHGAP8P85298 464 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 XIAPP98170 497 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 PTPRCAPQ14761 206 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 TSTD2Q5T7W7 516 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 DUPD1Q68J44 220 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 OR56A4Q8NGH8 313 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 BTN2A2Q8WVV5 523 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 GLYATL1Q969I3 302 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 DNAJC1Q96KC8 554 aaKnown RBP17.28■□□□□ 0.36
HDAC11-202ENST00000402259 KIFC1Q9BW19 673 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 GTPBP2Q9BX10 602 aaKnown RBP17.28■□□□□ 0.36
HDAC11-202ENST00000402259 LGR4Q9BXB1 951 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 L2HGDHQ9H9P8 463 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 VPS18Q9P253 973 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 FKBPLQ9UIM3 349 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 SOX13Q9UN79 622 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 SLC17A4Q9Y2C5 497 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 UTP11Q9Y3A2 253 aaKnown RBP17.28■□□□□ 0.36
HDAC11-202ENST00000402259 PCDHGB2Q9Y5G2 931 aa17.28■□□□□ 0.36
HDAC11-202ENST00000402259 MAGEB16A2A368 324 aa17.27■□□□□ 0.36
HDAC11-202ENST00000402259 SDR42E2A6NKP2 422 aa17.27■□□□□ 0.36
HDAC11-202ENST00000402259 AGAP14A8MT82 685 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms