RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ACVR1Q04771 509 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 STAT4Q14765 748 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 CCDC6Q16204 474 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 SKIDA1Q1XH10 827 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 ERCC6LQ2NKX8 1250 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 LAIR1Q6GTX8 287 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 FAM151BQ6UXP7 276 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 ZNF765Q7L2R6 523 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 PNPLA1Q8N8W4 532 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 DENND6BQ8NEG7 585 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 PPHLN1Q8NEY8 458 aaKnown RBP15.86■□□□□ 0.13
HMGA1-204ENST00000401473 PIGKQ92643 395 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 HDAC10Q969S8 669 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 PLEKHG4BQ96PX9 1271 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 EBNA1BP2Q99848 306 aaKnown RBP15.86■□□□□ 0.13
HMGA1-204ENST00000401473 C19orf43Q9BQ61 176 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 C1QTNF7Q9BXJ2 289 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 UGT1A7Q9HAW7 530 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 UGT1A10Q9HAW8 530 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 UGT1A8Q9HAW9 530 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 TMPRSS11EQ9UL52 423 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 CNOT6Q9ULM6 557 aaKnown RBP15.86■□□□□ 0.13
HMGA1-204ENST00000401473 OR1A2Q9Y585 309 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 ZNF106Q9H2Y7 1883 aaKnown RBP15.86■□□□□ 0.13
HMGA1-204ENST00000401473 PLXNB3Q9ULL4 1909 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 A0A1W2PR77 199 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 MAGEB16A2A368 324 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 H7C0S8 307 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 NDC80O14777 642 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 BCAT2O15382 392 aaPredicted RBP15.86■□□□□ 0.13
HMGA1-204ENST00000401473 ARNTP27540 789 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 CSNK1EP49674 416 aaKnown RBP15.86■□□□□ 0.13
HMGA1-204ENST00000401473 PFN3P60673 137 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 PDIA2Q13087 525 aaKnown RBP15.86■□□□□ 0.13
HMGA1-204ENST00000401473 NAA30Q147X3 362 aaPredicted RBP15.86■□□□□ 0.13
HMGA1-204ENST00000401473 CHRNA6Q15825 494 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 ATP13A5Q4VNC0 1218 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 TPRG1LQ5T0D9 272 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 ASCL5Q7RTU5 278 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 ABI3BPQ7Z7G0 1075 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 SYT12Q8IV01 421 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 IFT20Q8IY31 132 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 PTCD2Q8WV60 388 aaKnown RBP15.86■□□□□ 0.13
HMGA1-204ENST00000401473 CDH19Q9H159 772 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 ARRDC1-AS1Q9H2J1 176 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 MRM3Q9HC36 420 aaKnown RBP15.86■□□□□ 0.13
HMGA1-204ENST00000401473 KCTD5Q9NXV2 234 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 NFKBIL1Q9UBC1 381 aaPredicted RBP15.86■□□□□ 0.13
HMGA1-204ENST00000401473 RAB23Q9ULC3 237 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 RIMKLBQ9ULI2 386 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 NFU1Q9UMS0 254 aa15.86■□□□□ 0.13
HMGA1-204ENST00000401473 ZCWPW2A0A1B0GU75 182 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 FAM237BA0A1B0GVD1 139 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 OR51F1A6NGY5 319 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 FPGTO14772 594 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 PRSS56P0CW18 603 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 SPAM1P38567 509 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 HADHAP40939 763 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 CDKN1CP49918 316 aaPredicted RBP15.85■□□□□ 0.13
HMGA1-204ENST00000401473 ANKRD20A4Q4UJ75 823 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 PEAR1Q5VY43 1037 aaPredicted RBP15.85■□□□□ 0.13
HMGA1-204ENST00000401473 RAET1GQ6H3X3 334 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 NLRP9Q7RTR0 991 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 ANKMY2Q8IV38 441 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 OR13H1Q8NG92 308 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 PEX13Q92968 403 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 LOXL4Q96JB6 756 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 SPATA16Q9BXB7 569 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 SMOC1Q9H4F8 434 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 AASDHPPTQ9NRN7 309 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 IL1RAPL1Q9NZN1 696 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 CHMP2BQ9UQN3 213 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 RPS6KL1Q9Y6S9 549 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 ADAMTS9Q9P2N4 1935 aa15.85■□□□□ 0.13
HMGA1-204ENST00000401473 PIKFYVEQ9Y2I7 2098 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 GLYATL1P3A0A0U1RQE8 302 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 CCDC162PA2VCL2 907 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 PATE3B3GLJ2 98 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 SRP72O76094 671 aaKnown RBP15.84■□□□□ 0.13
HMGA1-204ENST00000401473 EPN2O95208 641 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 MYBL2P10244 700 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 CD38P28907 300 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 GPR1P46091 355 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 ARCN1P48444 511 aaKnown RBP15.84■□□□□ 0.13
HMGA1-204ENST00000401473 LAMB3Q13751 1172 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 HLTFQ14527 1009 aaKnown RBP eCLIP15.84■□□□□ 0.13
HMGA1-204ENST00000401473 Q6ZSR6 202 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 ZBED8Q8IZ13 594 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 UNC5BQ8IZJ1 945 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 SLC22A18ASQ8N1D0 253 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 DCLK2Q8N568 766 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 LRRC39Q96DD0 335 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 STAMBPL1Q96FJ0 436 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 APOOQ9BUR5 198 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 CAAP1Q9H8G2 361 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 SAMD15Q9P1V8 674 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 AGAP14A8MT82 685 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 PRAMEF1O95521 474 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 RETP07949 1114 aa15.84■□□□□ 0.13
HMGA1-204ENST00000401473 TSHRP16473 764 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms