RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ATPAF2Q8N5M1 289 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 LZTR1Q8N653 840 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 ANKRD20A12PQ8NF67 263 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 HSPH1Q92598 858 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 ZNF653Q96CK0 615 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 AP2M1Q96CW1 435 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 RTP4Q96DX8 246 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 AHCYL2Q96HN2 611 aaKnown RBP11.85□□□□□ -0.51
LINC00544-201ENST00000400540 CSPG4P5Q96PW8 444 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 SLC38A3Q99624 504 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 NT5MQ9NPB1 228 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 ZNF71Q9NQZ8 489 aaPredicted RBP11.85□□□□□ -0.51
LINC00544-201ENST00000400540 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.85□□□□□ -0.51
LINC00544-201ENST00000400540 LMBRD1Q9NUN5 540 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 KCTD5Q9NXV2 234 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 MYO1AQ9UBC5 1043 aa11.85□□□□□ -0.51
LINC00544-201ENST00000400540 NBASA2RRP1 2371 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 DDX3XO00571 662 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC00544-201ENST00000400540 FZD6O60353 706 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 FTLP02792 175 aaPredicted RBP11.84□□□□□ -0.51
LINC00544-201ENST00000400540 CDK11BP21127 795 aaKnown RBP11.84□□□□□ -0.51
LINC00544-201ENST00000400540 OAS2P29728 719 aaKnown RBP11.84□□□□□ -0.51
LINC00544-201ENST00000400540 RAB15P59190 212 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 GPLD1P80108 840 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 CDC20Q12834 499 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 NFATC2Q13469 925 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.84□□□□□ -0.51
LINC00544-201ENST00000400540 GALNT13Q8IUC8 556 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 SFRP1Q8N474 314 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.84□□□□□ -0.51
LINC00544-201ENST00000400540 COX14Q96I36 57 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 SLC45A3Q96JT2 553 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 DPYSL5Q9BPU6 564 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 ASPSCR1Q9BZE9 553 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 SPRY4Q9C004 299 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 HAUS4Q9H6D7 363 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 GPN2Q9H9Y4 310 aaPredicted RBP11.84□□□□□ -0.51
LINC00544-201ENST00000400540 PDP2Q9P2J9 529 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 ANKMY1Q9P2S6 941 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 KLHL3Q9UH77 587 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 PPIL1Q9Y3C6 166 aa11.84□□□□□ -0.51
LINC00544-201ENST00000400540 OAS3Q9Y6K5 1087 aaKnown RBP11.84□□□□□ -0.51
LINC00544-201ENST00000400540 LRRC10BA6NIK2 292 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 DNAJC6O75061 913 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 ATP1A1P05023 1023 aaKnown RBP11.83□□□□□ -0.52
LINC00544-201ENST00000400540 CCDC172P0C7W6 258 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 RARAP10276 462 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 NFKBIAP25963 317 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 ARL4AP40617 200 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 CASRP41180 1078 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 MAPK9P45984 424 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 ZNF135P52742 658 aaPredicted RBP11.83□□□□□ -0.52
LINC00544-201ENST00000400540 CDH6P55285 790 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 FOXK1P85037 733 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 MC2RQ01718 297 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 HHEXQ03014 270 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 PEX6Q13608 980 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 UBAP2LQ14157 1087 aaKnown RBP11.83□□□□□ -0.52
LINC00544-201ENST00000400540 ASIC2Q16515 512 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 MARC1Q5VT66 337 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 PPP1R2P3Q6NXS1 205 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 CHST15Q7LFX5 561 aaPredicted RBP11.83□□□□□ -0.52
LINC00544-201ENST00000400540 ARHGAP22Q7Z5H3 698 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 NLGN4XQ8N0W4 816 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 BBS5Q8N3I7 341 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 NLGN4YQ8NFZ3 816 aaPredicted RBP11.83□□□□□ -0.52
LINC00544-201ENST00000400540 OR10G6Q8NH81 332 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 BTBD6Q96KE9 485 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 RIOK2Q9BVS4 552 aaKnown RBP11.83□□□□□ -0.52
LINC00544-201ENST00000400540 TBC1D29Q9UFV1 150 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 TUBD1Q9UJT1 453 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 KCNK6Q9Y257 313 aa11.83□□□□□ -0.52
LINC00544-201ENST00000400540 MRPS18BQ9Y676 258 aaKnown RBP11.83□□□□□ -0.52
LINC00544-201ENST00000400540 USP9XQ93008 2570 aaPredicted RBP11.83□□□□□ -0.52
LINC00544-201ENST00000400540 USP9YO00507 2555 aaPredicted RBP11.82□□□□□ -0.52
LINC00544-201ENST00000400540 A0A0J9YYE9 177 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 MFSD11O43934 449 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 STK17BO94768 372 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 ASMTLO95671 621 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 TRBC1P01850 177 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 PCK1P35558 622 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 STC1P52823 247 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 DSC2Q02487 901 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 ITKQ08881 620 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 MMRN1Q13201 1228 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 STX1AQ16623 288 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 DEFB109BQ30KR1 87 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 RALGPS1Q5JS13 557 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 WDR74Q6RFH5 385 aaPredicted RBP11.82□□□□□ -0.52
LINC00544-201ENST00000400540 ZNF765Q7L2R6 523 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 TEX26Q8N6G2 289 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 AOPEPQ8N6M6 819 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 C9orf43Q8TAL5 461 aaPredicted RBP11.82□□□□□ -0.52
LINC00544-201ENST00000400540 LRRN4Q8WUT4 740 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 NSMCE1Q8WV22 266 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 STARD8Q92502 1023 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 NCSTNQ92542 709 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 CATSPER2Q96P56 530 aa11.82□□□□□ -0.52
LINC00544-201ENST00000400540 TEFMQ96QE5 360 aaKnown RBP11.82□□□□□ -0.52
LINC00544-201ENST00000400540 WDR24Q96S15 920 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms