RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 ALG1LQ6GMV1 187 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 ARL8BQ9NVJ2 186 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 GDAP2Q9NXN4 497 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 ZNF225Q9UK10 706 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 ERVK-11Q9UQG0 969 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 CCRL2O00421 344 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 MID1O15344 667 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 SUV39H1O43463 412 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 IFNGP01579 166 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 RHOCP08134 193 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 LHCGRP22888 699 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 ALDH4A1P30038 563 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 PIK3CBP42338 1070 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 RHOAP61586 193 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 CHAF1BQ13112 559 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 DEF8Q6ZN54 512 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 SNX20Q7Z614 316 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 GALNT12Q8IXK2 581 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 ZNF567Q8N184 647 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 C12orf50Q8NA57 414 aaPredicted RBP8.36□□□□□ -1.07
CHD8-201ENST00000399982 FAM84AQ96KN4 292 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 ZNF607Q96SK3 696 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 COLEC11Q9BWP8 271 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 CYTH4Q9UIA0 394 aa8.36□□□□□ -1.07
CHD8-201ENST00000399982 RBMX2Q9Y388 322 aaKnown RBP8.36□□□□□ -1.07
CHD8-201ENST00000399982 A0A0A0MRY4 1105 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 LIASO43766 372 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 COX7A2P14406 83 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 KCNA6P17658 529 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 CD40LGP29965 261 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 UQCRC1P31930 480 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 GDI2P50395 445 aaKnown RBP8.35□□□□□ -1.07
CHD8-201ENST00000399982 MED22Q15528 200 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 ALG10Q5BKT4 473 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 SLC30A8Q8IWU4 369 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 LNX2Q8N448 690 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 CERKQ8TCT0 537 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 PIH1D2Q8WWB5 315 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 C11orf24Q96F05 449 aaPredicted RBP8.35□□□□□ -1.07
CHD8-201ENST00000399982 SPATA13Q96N96 652 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 MKS1Q9NXB0 559 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 ZNHIT2Q9UHR6 403 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 FAM205AQ6ZU69 1335 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 PRAMEF33A0A0G2JMD5 474 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 KANTRA0A1W2PQU2 76 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 PRAMEF10O60809 474 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 THOP1P52888 689 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 FSTL1Q12841 308 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 DNASE1L3Q13609 305 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 C1orf94Q6P1W5 598 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 SYT12Q8IV01 421 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 SH3RF3Q8TEJ3 882 aaPredicted RBP8.35□□□□□ -1.07
CHD8-201ENST00000399982 ELMO1Q92556 727 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 FCRL4Q96PJ5 515 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 ZCCHC2Q9C0B9 1178 aaKnown RBP8.35□□□□□ -1.07
CHD8-201ENST00000399982 MMP27Q9H306 513 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 DDIT4Q9NX09 232 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 KLK14Q9P0G3 267 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 TRPS1Q9UHF7 1281 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 OAS3Q9Y6K5 1087 aaKnown RBP8.35□□□□□ -1.07
CHD8-201ENST00000399982 CD72P21854 359 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 CHMP24386 653 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 IGFBP5P24593 272 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 MSX1P28360 303 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 RBL1P28749 1068 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 USP4Q13107 963 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 APOBEC3FQ8IUX4 373 aaKnown RBP8.35□□□□□ -1.07
CHD8-201ENST00000399982 PCDH20Q8N6Y1 951 aaKnown RBP8.35□□□□□ -1.07
CHD8-201ENST00000399982 GTF3C2Q8WUA4 911 aaPredicted RBP8.35□□□□□ -1.07
CHD8-201ENST00000399982 CERS2Q96G23 380 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 FAM105AQ9NUU6 356 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 ZNF639Q9UID6 485 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 AXIN2Q9Y2T1 843 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 PRAMEF1O95521 474 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 GRIA4P48058 902 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 FNBP1LQ5T0N5 605 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 ATF7IP2Q5U623 682 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 S100PBPQ96BU1 408 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 OPTCQ9UBM4 332 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 ALG5Q9Y673 324 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 SHBGP04278 402 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 GSTT2P0CG29 244 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 MTHFD1P11586 935 aaKnown RBP8.35□□□□□ -1.07
CHD8-201ENST00000399982 BUD31P41223 144 aaPredicted RBP8.35□□□□□ -1.07
CHD8-201ENST00000399982 ZNF157P51786 506 aaPredicted RBP8.35□□□□□ -1.07
CHD8-201ENST00000399982 PER3P56645 1201 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 ILF3Q12906 894 aaKnown RBP eCLIP8.35□□□□□ -1.07
CHD8-201ENST00000399982 VMACQ2NL98 169 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 LYPLAL1Q5VWZ2 237 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 ANO7Q6IWH7 933 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 ZNF720Q7Z2F6 126 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 TRAPPC5Q8IUR0 188 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 DPF1Q92782 380 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 NXF3Q9H4D5 531 aaKnown RBP8.35□□□□□ -1.07
CHD8-201ENST00000399982 TFR2Q9UP52 801 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 NOX1Q9Y5S8 564 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 PDCD5O14737 125 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 ACSM2AQ08AH3 577 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 MPPE1Q53F39 396 aa8.35□□□□□ -1.07
CHD8-201ENST00000399982 ACSM2BQ68CK6 577 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms