RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 ADH1AP07327 375 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 SNHG28P0DPA3 235 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 TMPRSS11BQ86T26 416 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 FIBCD1Q8N539 461 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 ARL10Q8N8L6 244 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 PPCDCQ96CD2 204 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 SLC47A1Q96FL8 570 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 ITCHQ96J02 903 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 ALG2Q9H553 416 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 INTS7Q9NVH2 962 aaKnown RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 KIDINS220Q9ULH0 1771 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 AP3D1O14617 1153 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 FFAR2O15552 330 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 SCN2BO60939 215 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 PSIP1O75475 530 aaKnown RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 NADKO95544 446 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 PTPN5P54829 565 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 TAB1Q15750 504 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 CES5AQ6NT32 575 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 ESRP1Q6NXG1 681 aaKnown RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 TRIM40Q6P9F5 258 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 PPTC7Q8NI37 304 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 MYDGFQ969H8 173 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 SLC38A2Q96QD8 506 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 ELL3Q9HB65 397 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 ARHGEF4Q9NR80 690 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 COQ6Q9Y2Z9 468 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 CLUHO75153 1309 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 ABLIM1O14639 778 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 DHX15O43143 795 aaKnown RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 CDK14O94921 469 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 ITGA2P17301 1181 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 SSR2P43308 183 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 UGT2B15P54855 530 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 PYDC2Q56P42 97 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 C6orf52Q5T4I8 152 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 ZNF567Q8N184 647 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 AADATQ8N5Z0 425 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 CPSF7Q8N684 471 aaKnown RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 OR7D4Q8NG98 312 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 OR4A15Q8NGL6 344 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 IPCEF1Q8WWN9 437 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 NKD2Q969F2 451 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 BTN2A3PQ96KV6 586 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 RTKNQ9BST9 563 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 TRIM39Q9HCM9 518 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 PADI3Q9ULW8 664 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 RAI2Q9Y5P3 530 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 G3V2T6 193 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 ACSL4O60488 711 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 ATP6V1G1O75348 118 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 CXCL14O95715 111 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 TRBC1P01850 177 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 EFNA1P20827 205 aaPredicted RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 CORO1AP31146 461 aaKnown RBP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 SLC4A11Q8NBS3 891 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 LPGAT1Q92604 370 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 TNKS2Q9H2K2 1166 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 KLHL31Q9H511 634 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 PDZD7Q9H5P4 517 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 DIABLOQ9NR28 239 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.13□□□□□ -0.31
ITSN1-208ENST00000399349 AGLP35573 1532 aa13.13□□□□□ -0.31
ITSN1-208ENST00000399349 OR2AG2A6NM03 316 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 PLSCR1O15162 318 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 IDH3BO43837 385 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 METTL18O95568 372 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 MMP3P08254 477 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 HSPA7P48741 367 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 NRLP54845 237 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 GDF10P55107 478 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 PCBP1Q15365 356 aaKnown RBP eCLIP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 SH3PXD2AQ5TCZ1 1133 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 IRAK1BP1Q5VVH5 260 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 MFSD5Q6N075 450 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 ZNF557Q8N988 423 aaPredicted RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 KAT2AQ92830 837 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 LPIN3Q9BQK8 851 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 FTHL17Q9BXU8 183 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 DENND2DQ9H6A0 471 aaPredicted RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 SGK2Q9HBY8 427 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 APOBEC3GQ9HC16 384 aaKnown RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 TMEM138Q9NPI0 162 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 CD84Q9UIB8 345 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 PSMD13Q9UNM6 376 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 RPTORQ8N122 1335 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 E9PAM4 449 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 CCNYL3P0C7X3 344 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 UQCRBP14927 111 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 WARSP23381 471 aaKnown RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 CTSKP43235 329 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 SLC34A3Q8N130 599 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 DEPDC4Q8N2C3 294 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 ZNF655Q8N720 491 aaPredicted RBP13.12□□□□□ -0.31
ITSN1-208ENST00000399349 OR52J3Q8NH60 311 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 XAGE5Q8WWM1 108 aa13.12□□□□□ -0.31
ITSN1-208ENST00000399349 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.12□□□□□ -0.311e-6■■■■■ 31.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms